Guide to the Human Genome
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Name: GRAMD3 Sequence: fasta or formatted (440aa) NCBI GI: 226443022
Description:

GRAM domain containing 3 isoform 4

Not currently referenced in the text

Other entries for this name:
alt prot {432aa} GRAM domain containing 3 isoform 2
alt prot {447aa} GRAM domain containing 3 isoform 1
alt prot {328aa} GRAM domain containing 3 isoform 3
alt prot {416aa} GRAM domain containing 3 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         25           2
 C cysteine            2.0          9           1
 D aspartate           4.1         18           1
 E glutamate           5.5         24           2
 F phenylalanine       4.1         18           1
 G glycine             4.1         18           1
 H histidine           2.7         12           2
 I isoleucine          4.5         20           2
 K lysine              8.0         35           2
 L leucine            10.0         44           2
 M methionine          1.4          6           1
 N asparagine          5.2         23           2
 P proline             5.0         22           1
 Q glutamine           5.9         26           2
 R arginine            5.9         26           2
 S serine             10.9         48           5
 T threonine           6.1         27           1
 V valine              5.9         26           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRAM domain containing 3 isoform 4 
GRAMD3                0.811   GRAM domain containing 3 isoform 5 
GRAMD3                0.811   GRAM domain containing 3 isoform 1 
GRAMD3                0.811   GRAM domain containing 3 isoform 2 
GRAMD3                0.728   GRAM domain containing 3 isoform 3 
GRAMD2                0.135   GRAM domain containing 2 
GRAMD1A               0.094   GRAM domain containing 1A isoform 2 
GRAMD1A               0.093   GRAM domain containing 1A isoform 1 
GRAMD1B               0.087   GRAM domain containing 1B 
GRAMD1C               0.084   GRAM domain containing 1C 
TBC1D9                0.043   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D8                0.034   TBC1 domain family, member 8 
TBC1D9B               0.026   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.026   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D8B               0.022   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D8B               0.022   TBC1 domain family, member 8B (with GRAM domain) iso...
GRAMD4                0.015   death-inducing-protein 
GPR110                0.009   G-protein coupled receptor 110 isoform 1 
CNGA1                 0.008   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.008   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
EXO1                  0.008   exonuclease 1 isoform b 
EXO1                  0.008   exonuclease 1 isoform a 
EXO1                  0.008   exonuclease 1 isoform b 
RIN1                  0.007   ras inhibitor RIN1 
FAM135A               0.007   hypothetical protein LOC57579 isoform c 
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
KIAA1586              0.007   hypothetical protein LOC57691 
HDGF2                 0.007   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.007   hepatoma-derived growth factor-related protein 2 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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