EXO1 27285

Name: EXO1	Sequence: fasta or formatted (846aa)		NCBI GI: 39995071
Description: exonuclease 1 isoform b		Referenced in: DNases, Recombination, and DNA Repair
Other entries for this name: alt mRNA [846aa] exonuclease 1 isoform b alt prot [803aa] exonuclease 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 48 2 C cysteine 2.5 21 1 D aspartate 6.6 56 2 E glutamate 6.1 52 2 F phenylalanine 3.8 32 2 G glycine 5.4 46 2 H histidine 1.9 16 2 I isoleucine 5.1 43 2 K lysine 8.7 74 2 L leucine 8.5 72 2 M methionine 1.2 10 1 N asparagine 5.0 42 2 P proline 5.6 47 2 Q glutamine 4.1 35 2 R arginine 5.2 44 2 S serine 11.6 98 3 T threonine 4.8 41 2 V valine 5.3 45 3 W tryptophan 0.6 5 1 Y tyrosine 2.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 exonuclease 1 isoform b EXO1 1.000 exonuclease 1 isoform b EXO1 0.946 exonuclease 1 isoform a FEN1 0.046 flap structure-specific endonuclease 1 GEN1 0.020 Gen homolog 1, endonuclease GEN1 0.020 Gen homolog 1, endonuclease DSPP 0.019 dentin sialophosphoprotein preproprotein DMP1 0.015 dentin matrix acidic phosphoprotein 1 isoform 1 precu... DMP1 0.015 dentin matrix acidic phosphoprotein 1 isoform 2 pre... ERCC5 0.013 XPG-complementing protein MUC3B 0.011 PREDICTED: mucin 3B, cell surface associated, parti... CHD9 0.010 chromodomain helicase DNA binding protein 9 FSCB 0.010 fibrous sheath CABYR binding protein ASTE1 0.010 asteroid homolog 1 C1orf113 0.010 SH3 domain-containing protein C1orf113 isoform 1 [H... C1orf113 0.010 SH3 domain-containing protein C1orf113 isoform 2 [H... LOC729815 0.009 PREDICTED: hypothetical protein FAM120B 0.009 family with sequence similarity 120B BRCA1 0.009 breast cancer 1, early onset isoform 2 BRCA1 0.009 breast cancer 1, early onset isoform 3 BRCA1 0.009 breast cancer 1, early onset isoform 1 LOC729815 0.009 PREDICTED: hypothetical protein NKTR 0.009 natural killer-tumor recognition sequence AP3B2 0.008 adaptor-related protein complex 3, beta 2 subunit [H... ASXL2 0.008 additional sex combs like 2 EML4 0.008 echinoderm microtubule associated protein like 4 is... EML4 0.008 echinoderm microtubule associated protein like 4 iso... TLE3 0.008 transducin-like enhancer protein 3 isoform b TLE3 0.008 transducin-like enhancer protein 3 isoform c TLE3 0.008 transducin-like enhancer protein 3 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.