Guide to the Human Genome
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Name: RIN1 Sequence: fasta or formatted (783aa) NCBI GI: 68989256
Description:

ras inhibitor RIN1

Referenced in:

Rab
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         78           4
 C cysteine            1.9         15           1
 D aspartate           2.0         16           1
 E glutamate           7.8         61           3
 F phenylalanine       2.2         17           2
 G glycine             8.9         70           2
 H histidine           2.4         19           2
 I isoleucine          1.4         11           1
 K lysine              2.6         20           1
 L leucine            14.6        114           3
 M methionine          1.3         10           1
 N asparagine          0.9          7           1
 P proline             9.7         76           4
 Q glutamine           6.1         48           1
 R arginine            7.8         61           3
 S serine              9.3         73           3
 T threonine           4.3         34           2
 V valine              4.5         35           2
 W tryptophan          0.5          4           1
 Y tyrosine            1.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras inhibitor RIN1 
RIN2                  0.138   Ras and Rab interactor 2 
RIN3                  0.091   Ras and Rab interactor 3 
RINL                  0.040   Ras and Rab interactor-like 
C16orf7               0.019   chromosome 16 open reading frame 7 
RABGEF1               0.018   RAB guanine nucleotide exchange factor (GEF) 1 
TNS3                  0.015   tensin 3 
TBKBP1                0.014   TBK1 binding protein 1 
KIAA0754              0.013   hypothetical protein LOC643314 
GRIN3A                0.012   glutamate receptor, ionotropic, N-methyl-D-aspartat...
TNS4                  0.012   tensin 4 
COL17A1               0.011   alpha 1 type XVII collagen 
RPGR                  0.011   retinitis pigmentosa GTPase regulator isoform C [Hom...
SOCS1                 0.010   suppressor of cytokine signaling 1 
KIAA1602              0.010   hypothetical protein LOC57701 
KIAA1522              0.010   hypothetical protein LOC57648 
ANKRD34A              0.010   ankyrin repeat domain 34 
COL3A1                0.010   collagen type III alpha 1 preproprotein 
NACA                  0.010   nascent polypeptide-associated complex alpha subuni...
PELP1                 0.010   proline, glutamic acid and leucine rich protein 1 [...
SLC24A1               0.010   solute carrier family 24 (sodium/potassium/calcium ex...
GRID2IP               0.010   glutamate receptor, ionotropic, delta 2 (Grid2) int...
LMOD2                 0.010   leiomodin 2 (cardiac) 
DMRTA1                0.010   DMRT-like family A1 
DIAPH1                0.009   diaphanous 1 isoform 2 
DIAPH1                0.009   diaphanous 1 isoform 1 
C6orf132              0.009   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.009   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.009   PREDICTED: hypothetical protein LOC647024 
TET3                  0.009   tet oncogene family member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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