Guide to the Human Genome
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Name: TBC1D9B Sequence: fasta or formatted (1233aa) NCBI GI: 45597177
Description:

TBC1 domain family, member 9B (with GRAM domain) isoform b

Referenced in:

Rab

Other entries for this name:
alt prot [1250aa] TBC1 domain family, member 9B (with GRAM domain) isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         86           2
 C cysteine            1.6         20           1
 D aspartate           5.4         66           2
 E glutamate           9.1        112           3
 F phenylalanine       4.5         55           2
 G glycine             6.2         76           3
 H histidine           2.0         25           1
 I isoleucine          4.2         52           2
 K lysine              5.6         69           2
 L leucine            11.1        137           3
 M methionine          2.6         32           1
 N asparagine          2.5         31           2
 P proline             5.1         63           2
 Q glutamine           4.5         55           1
 R arginine            5.4         66           3
 S serine              8.7        107           3
 T threonine           4.7         58           2
 V valine              5.8         71           3
 W tryptophan          1.5         18           1
 Y tyrosine            2.8         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 9B (with GRAM domain) iso... 
TBC1D9B               0.995   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9                0.621   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D8                0.437   TBC1 domain family, member 8 
TBC1D8B               0.428   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D8B               0.266   TBC1 domain family, member 8B (with GRAM domain) iso...
SGSM3                 0.057   small G protein signaling modulator 3 
GRTP1                 0.052   growth hormone regulated TBC protein 1 
TBC1D2B               0.047   TBC1 domain family, member 2B isoform b 
TBC1D2B               0.046   TBC1 domain family, member 2B isoform a 
TBC1D10C              0.044   TBC1 domain family, member 10C 
TBC1D10B              0.042   TBC1 domain family, member 10B 
TBC1D10A              0.042   TBC1 domain family, member 10A 
EVI5L                 0.037   ecotropic viral integration site 5-like isoform 2 [H...
TBC1D2                0.036   TBC1 domain family, member 2 
EVI5L                 0.036   ecotropic viral integration site 5-like isoform 1 [...
RABGAP1L              0.035   RAB GTPase activating protein 1-like isoform A [Homo...
EVI5                  0.034   ecotropic viral integration site 5 
TBC1D30               0.033   PREDICTED: TBC1 domain family, member 30 
TBC1D30               0.033   PREDICTED: TBC1 domain family, member 30 
TBC1D30               0.033   PREDICTED: TBC1 domain family, member 30 
RABGAP1               0.033   RAB GTPase activating protein 1 
USP6NL                0.032   USP6 N-terminal like isoform 1 
USP6NL                0.032   USP6 N-terminal like isoform 2 
TBC1D1                0.029   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
TBC1D4                0.027   TBC1 domain family, member 4 
USP6                  0.021   ubiquitin specific protease 6 
TBC1D3F               0.020   TBC1 domain family, member 3F 
TBC1D3B               0.019   TBC1 domain family, member 3B 
TBC1D3H               0.019   TBC1 domain family, member 3H 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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