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Search of human proteins with 19923391
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923391 homeobox D3 [Homo sapiens]
(432 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923391 homeobox D3 [Homo sapiens] 909 0.0
gi|24497513 homeobox A3 isoform a [Homo sapiens] 401 e-112
gi|13562112 homeobox A3 isoform a [Homo sapiens] 401 e-112
gi|84570137 homeobox B3 [Homo sapiens] 394 e-109
gi|24497515 homeobox A3 isoform b [Homo sapiens] 315 7e-86
gi|10140847 homeobox A2 [Homo sapiens] 130 2e-30
gi|4504465 homeobox B2 [Homo sapiens] 126 3e-29
gi|23397672 homeobox D4 [Homo sapiens] 125 7e-29
gi|13273315 homeobox B4 [Homo sapiens] 121 1e-27
gi|148613882 homeobox A4 [Homo sapiens] 114 2e-25
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens] 112 7e-25
gi|24497517 homeobox A5 [Homo sapiens] 112 7e-25
gi|24497538 homeobox C4 [Homo sapiens] 112 7e-25
gi|24497540 homeobox C4 [Homo sapiens] 112 7e-25
gi|13375632 homeobox D1 [Homo sapiens] 110 3e-24
gi|13489077 homeobox A6 [Homo sapiens] 109 6e-24
gi|4504469 homeobox B5 [Homo sapiens] 107 2e-23
gi|24497526 homeobox B1 [Homo sapiens] 104 1e-22
gi|11321638 homeobox C5 [Homo sapiens] 103 3e-22
gi|15029506 homeobox D8 [Homo sapiens] 101 1e-21
gi|24497556 homeobox A7 [Homo sapiens] 100 3e-21
gi|23503237 homeobox B6 [Homo sapiens] 99 6e-21
gi|33457326 GS homeobox 1 [Homo sapiens] 96 5e-20
gi|85068580 homeobox B7 [Homo sapiens] 96 6e-20
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 95 1e-19
gi|5031761 homeobox A1 isoform a [Homo sapiens] 95 1e-19
gi|121114296 caudal type homeobox 1 [Homo sapiens] 95 1e-19
gi|182765442 homeobox A10 isoform a [Homo sapiens] 94 2e-19
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 94 2e-19
gi|169636435 caudal type homeobox 2 [Homo sapiens] 94 3e-19
>gi|19923391 homeobox D3 [Homo sapiens]
Length = 432
Score = 909 bits (2350), Expect = 0.0
Identities = 432/432 (100%), Positives = 432/432 (100%)
Query: 1 MLFEQGQQALELPECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLD 60
MLFEQGQQALELPECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLD
Sbjct: 1 MLFEQGQQALELPECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLD 60
Query: 61 TDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPP 120
TDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPP
Sbjct: 61 TDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPP 120
Query: 121 PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATA 180
PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATA
Sbjct: 121 PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATA 180
Query: 181 GESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 240
GESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI
Sbjct: 181 GESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 240
Query: 241 WFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPP 300
WFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPP
Sbjct: 241 WFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSPP 300
Query: 301 AFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGG 360
AFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGG
Sbjct: 301 AFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGG 360
Query: 361 NFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNHHHGPCDPHPTYTDLSAHHSSQ 420
NFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNHHHGPCDPHPTYTDLSAHHSSQ
Sbjct: 361 NFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNHHHGPCDPHPTYTDLSAHHSSQ 420
Query: 421 GRLPEAPKLTHL 432
GRLPEAPKLTHL
Sbjct: 421 GRLPEAPKLTHL 432
>gi|24497513 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 401 bits (1030), Expect = e-112
Identities = 231/455 (50%), Positives = 283/455 (62%), Gaps = 51/455 (11%)
Query: 17 MQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPL 76
MQKA YY++ ++GGY Y + + + Y+ QPYP AA + D +Y ACS+QS P
Sbjct: 1 MQKATYYDSSAIYGGYPY-QAANGFAYNANQQPYPASAALGA-DGEYHRPACSLQS--PS 56
Query: 77 RAPAH-KGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQ-------------QPPQPPPP 122
A H K EL+ +C+R + SQPP L QPPQP P
Sbjct: 57 SAGGHPKAHELSEACLRTLSAPP------SQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQ 110
Query: 123 PPTLPPSSPTNPGGGVPAKKPKGGP---NASSS----SATISKQIFPWMKESRQNSKQKN 175
PP P++P P P + P NA+ S S T++KQIFPWMKESRQN+KQK
Sbjct: 111 PPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKT 170
Query: 176 SCATAGESCE-DKSPPGPAS-KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 233
S +++GESC DKSPPG AS KR RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL
Sbjct: 171 SSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 230
Query: 234 TERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLA 293
TERQIKIWFQNRRMKYKKDQK KG+L S QSP RSP GA G++ L V +
Sbjct: 231 TERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSL--VNSVP 288
Query: 294 YDAPSPPAFAKSQPNMYGL--AAYTAPLSSCL---PQQKRYAA--------PEFEPHPMA 340
Y+ SPP F+K YGL A+Y A L SC P QKRY A P+++PH
Sbjct: 289 YEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHG 348
Query: 341 SNG-GGFASANLQGSPVYVGGNFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNH 399
G G + + ++QGSPV+VGG++VE M+ + +F L HL H +S ++DY A + H
Sbjct: 349 LQGNGSYGTPHIQGSPVFVGGSYVEPMSNSGPALFGLTHLPHAASGAMDYGGAGPLGSGH 408
Query: 400 HH--GPCDPHPTYTDLSAHHSSQGRLPEAPKLTHL 432
HH GP +PHPTYTDL+ HH SQGR+ EAPKLTHL
Sbjct: 409 HHGPGPGEPHPTYTDLTGHHPSQGRIQEAPKLTHL 443
>gi|13562112 homeobox A3 isoform a [Homo sapiens]
Length = 443
Score = 401 bits (1030), Expect = e-112
Identities = 231/455 (50%), Positives = 283/455 (62%), Gaps = 51/455 (11%)
Query: 17 MQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPL 76
MQKA YY++ ++GGY Y + + + Y+ QPYP AA + D +Y ACS+QS P
Sbjct: 1 MQKATYYDSSAIYGGYPY-QAANGFAYNANQQPYPASAALGA-DGEYHRPACSLQS--PS 56
Query: 77 RAPAH-KGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQ-------------QPPQPPPP 122
A H K EL+ +C+R + SQPP L QPPQP P
Sbjct: 57 SAGGHPKAHELSEACLRTLSAPP------SQPPSLGEPPLHPPPPQAAPPAPQPPQPAPQ 110
Query: 123 PPTLPPSSPTNPGGGVPAKKPKGGP---NASSS----SATISKQIFPWMKESRQNSKQKN 175
PP P++P P P + P NA+ S S T++KQIFPWMKESRQN+KQK
Sbjct: 111 PPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKT 170
Query: 176 SCATAGESCE-DKSPPGPAS-KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 233
S +++GESC DKSPPG AS KR RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL
Sbjct: 171 SSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 230
Query: 234 TERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLA 293
TERQIKIWFQNRRMKYKKDQK KG+L S QSP RSP GA G++ L V +
Sbjct: 231 TERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSMHSL--VNSVP 288
Query: 294 YDAPSPPAFAKSQPNMYGL--AAYTAPLSSCL---PQQKRYAA--------PEFEPHPMA 340
Y+ SPP F+K YGL A+Y A L SC P QKRY A P+++PH
Sbjct: 289 YEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGAGGTPDYDPHAHG 348
Query: 341 SNG-GGFASANLQGSPVYVGGNFVESMAPASGPVFNLGHLSHPSSASVDYSCAAQIPGNH 399
G G + + ++QGSPV+VGG++VE M+ + +F L HL H +S ++DY A + H
Sbjct: 349 LQGNGSYGTPHIQGSPVFVGGSYVEPMSNSGPALFGLTHLPHAASGAMDYGGAGPLGSGH 408
Query: 400 HH--GPCDPHPTYTDLSAHHSSQGRLPEAPKLTHL 432
HH GP +PHPTYTDL+ HH SQGR+ EAPKLTHL
Sbjct: 409 HHGPGPGEPHPTYTDLTGHHPSQGRIQEAPKLTHL 443
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 394 bits (1011), Expect = e-109
Identities = 230/454 (50%), Positives = 278/454 (61%), Gaps = 61/454 (13%)
Query: 17 MQKAAYYENPG--LFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSA 74
MQKA YY+N LFGGY ++ +G+ P P PP AA+ L+ DY SACS+QS
Sbjct: 1 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVP--PQPPFQAATHLEGDYQRSACSLQSLG 58
Query: 75 PLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPP--PTLPPSSPT 132
AP K ELNGSCMRPG P L++ PP PPP PT S+ +
Sbjct: 59 NA-APHAKSKELNGSCMRPGLA----------PEPLSA---PPGSPPPSAAPTSATSNSS 104
Query: 133 NPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCE------- 185
N GG + PK GP +S T++KQIFPWMKESRQ SK KN+ E C
Sbjct: 105 NGGGPSKSGPPKCGPGTNS---TLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGG 161
Query: 186 -----------------DKSPPGPA-SKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEM 227
DKSPPG A SKR RTAYTSAQLVELEKEFHFNRYLCRPRRVEM
Sbjct: 162 GGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEM 221
Query: 228 ANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSP--PLGGAAGHVAYSGQ 285
ANLLNL+ERQIKIWFQNRRMKYKKDQKAKG+ S SP SP P+ AG +
Sbjct: 222 ANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHS 281
Query: 286 LPPVPGLAYDAPSPPAFAKSQPNMYGLAA-YTAPLSSCLPQQK--RYAAPEFEPHPMASN 342
+ P +Y++PSPPAF K+ N Y L + Y PL C QK APE+EPH + +N
Sbjct: 282 MTP----SYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQAN 337
Query: 343 GGGFASANLQGSPVYV-GGNFVESMAPASGP-VFNLGHLSHPSSASVDYSCAAQIPGNHH 400
GG + + +QGSPVYV GG + + + P +GP ++ L HLSH S ++DY+ A + + H
Sbjct: 338 GGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQH 397
Query: 401 HGPCDPHPTYTDLSAHHS--SQGRLPEAPKLTHL 432
HGPC+PHPTYTDLS+HH+ QGR+ EAPKLTHL
Sbjct: 398 HGPCEPHPTYTDLSSHHAPPPQGRIQEAPKLTHL 431
>gi|24497515 homeobox A3 isoform b [Homo sapiens]
Length = 285
Score = 315 bits (806), Expect = 7e-86
Identities = 170/287 (59%), Positives = 201/287 (70%), Gaps = 20/287 (6%)
Query: 164 MKESRQNSKQKNSCATAGESCE-DKSPPGPAS-KRVRTAYTSAQLVELEKEFHFNRYLCR 221
MKESRQN+KQK S +++GESC DKSPPG AS KR RTAYTSAQLVELEKEFHFNRYLCR
Sbjct: 1 MKESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCR 60
Query: 222 PRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVA 281
PRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK KG+L S QSP RSP GA G++
Sbjct: 61 PRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLN 120
Query: 282 YSGQLPPVPGLAYDAPSPPAFAKSQPNMYGL--AAYTAPLSSCL---PQQKRYAA----- 331
L V + Y+ SPP F+K YGL A+Y A L SC P QKRY A
Sbjct: 121 SMHSL--VNSVPYEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGAGA 178
Query: 332 ---PEFEPHPMASNG-GGFASANLQGSPVYVGGNFVESMAPASGPVFNLGHLSHPSSASV 387
P+++PH G G + + ++QGSPV+VGG++VE M+ + +F L HL H +S ++
Sbjct: 179 GGTPDYDPHAHGLQGNGSYGTPHIQGSPVFVGGSYVEPMSNSGPALFGLTHLPHAASGAM 238
Query: 388 DYSCAAQIPGNHHH--GPCDPHPTYTDLSAHHSSQGRLPEAPKLTHL 432
DY A + HHH GP +PHPTYTDL+ HH SQGR+ EAPKLTHL
Sbjct: 239 DYGGAGPLGSGHHHGPGPGEPHPTYTDLTGHHPSQGRIQEAPKLTHL 285
>gi|10140847 homeobox A2 [Homo sapiens]
Length = 376
Score = 130 bits (327), Expect = 2e-30
Identities = 69/157 (43%), Positives = 90/157 (57%), Gaps = 19/157 (12%)
Query: 119 PPPPPPTLPP----SSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQK 174
PPP T+P S P + GG P P G + + + +PWMKE + K
Sbjct: 49 PPPFEQTIPSLNPGSHPRHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTA 108
Query: 175 ---------------NSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 219
+C + ES E G S+R+RTAYT+ QL+ELEKEFHFN+YL
Sbjct: 109 LLPAAAAAATAAATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYL 168
Query: 220 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 256
CRPRRVE+A LL+LTERQ+K+WFQNRRMK+K+ + K
Sbjct: 169 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCK 205
>gi|4504465 homeobox B2 [Homo sapiens]
Length = 356
Score = 126 bits (317), Expect = 3e-29
Identities = 85/235 (36%), Positives = 115/235 (48%), Gaps = 48/235 (20%)
Query: 112 SEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNS 171
+E P PPPPPP LP + P + KK P+ S++S + + P
Sbjct: 72 AEDGPALPPPPPPPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSPAASAVP--------- 122
Query: 172 KQKNSCATAGESCEDKSPP---GPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMA 228
+ G + P G ++R+RTAYT+ QL+ELEKEFHFN+YLCRPRRVE+A
Sbjct: 123 -----ASGVGSPADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIA 177
Query: 229 NLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPP 288
LL+LTERQ+K+WFQNRRMK+K+ Q+ R PP G P
Sbjct: 178 ALLDLTERQVKVWFQNRRMKHKR-------------QTQHREPPDGE-----------PA 213
Query: 289 VPGLAYDAPSP---PAFAKSQPNMYGLAAYTAPLSSCLPQQKRYAAPEFEPHPMA 340
PG D P PA + P+ A+ A + C P + A +P P+A
Sbjct: 214 CPGALEDICDPAEEPAASPGGPS----ASRAAWEACCHPPEVVPGALSADPRPLA 264
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 125 bits (314), Expect = 7e-29
Identities = 100/272 (36%), Positives = 118/272 (43%), Gaps = 61/272 (22%)
Query: 28 LFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLD---TDYPGSACSIQSSAPLRAPAHKGA 84
L GGY + D YG + PP D + GS S+ P R
Sbjct: 24 LQGGYLGEQGADYYGGGAQGADFQPPGLYPRPDFGEQPFGGSGPGPGSALPAR------- 76
Query: 85 ELNGSCMRPGTGNSQGGGGGSQP-PGLNSEQQPPQPPPPPPTLP------PSSPTNPGGG 137
G G GG GG PG E P P PPP LP S P P G
Sbjct: 77 ---------GHGQEPGGPGGHYAAPG---EPCPAPPAPPPAPLPGARAYSQSDPKQPPSG 124
Query: 138 VPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRV 197
K+P ++PWMK+ NS N T GE KR
Sbjct: 125 TALKQPA--------------VVYPWMKKVHVNSVNPNY--TGGEP-----------KRS 157
Query: 198 RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
RTAYT Q++ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KKD K
Sbjct: 158 RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 217
Query: 258 ILHSPASQSPERSPPLGGAAGHVAYSGQLPPV 289
+S S S + VA S L P+
Sbjct: 218 TKGRSSSSSSSSS-----CSSSVAPSQHLQPM 244
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 121 bits (303), Expect = 1e-27
Identities = 77/189 (40%), Positives = 92/189 (48%), Gaps = 42/189 (22%)
Query: 108 PGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSS-------------- 153
PG PP PPPPPP L P +P P G +P A SSS
Sbjct: 71 PGPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHPS 130
Query: 154 ----ATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVEL 209
A ++PWM++ ++ N G KR RTAYT Q++EL
Sbjct: 131 PSHSACKEPVVYPWMRKVHVSTVNPNYA-------------GGEPKRSRTAYTRQQVLEL 177
Query: 210 EKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPER 269
EKEFH+NRYL R RRVE+A+ L L+ERQIKIWFQNRRMK+KKD K P
Sbjct: 178 EKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKKDHKL-----------PNT 226
Query: 270 SPPLGGAAG 278
GGAAG
Sbjct: 227 KIRSGGAAG 235
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 114 bits (285), Expect = 2e-25
Identities = 95/282 (33%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 31 GYGYSKTTDTYGYSTPHQPYPPPAAA----SSLDTDYP----GSACSIQSSAPLRAPAHK 82
G G T Y T +P P AA + DT YP G A + P + PA
Sbjct: 64 GGGREPTASYYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQA 123
Query: 83 GAELNG----SCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGV 138
+G ++P PP L PP P P + GG
Sbjct: 124 KGPAHGLHASHVLQP-----------QLPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSA 172
Query: 139 PAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVR 198
PA + ++PWMK+ S + S G KR R
Sbjct: 173 PACPLLLADKSPLGLKGKEPVVYPWMKKIHV-------------SAVNPSYNGGEPKRSR 219
Query: 199 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGI 258
TAYT Q++ELEKEFHFNRYL R RR+E+A+ L L+ERQ+KIWFQNRRMK+KKD K
Sbjct: 220 TAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNT 279
Query: 259 -LHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYDAPSP 299
+ S S S PP G A S L P P + P P
Sbjct: 280 KMRSSNSASASAGPP--GKA--QTQSPHLHPHPHPSTSTPVP 317
Score = 30.8 bits (68), Expect = 2.5
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 94 GTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSS 153
G+G + GG GG PG QQPP PP L + GGG P +
Sbjct: 28 GSGGADGGPGGG--PGY---QQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREP 82
Query: 154 ATISKQIFP 162
A + ++P
Sbjct: 83 AYPAAALYP 91
>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
Length = 283
Score = 112 bits (280), Expect = 7e-25
Identities = 93/258 (36%), Positives = 122/258 (47%), Gaps = 64/258 (24%)
Query: 105 SQPPGLNSEQQPPQPPP--------------PPPTLP---PSSPTNPGGG-----VPAK- 141
S P L +QPP PPP PP P P +P +PA+
Sbjct: 31 SPPACLYMGRQPPPPPPHPFPGALGALEQGSPPDISPYEVPPLADDPAVAHLHHHLPAQL 90
Query: 142 ---KPKGGPNASSSSATISKQI------FPWMKESRQNSKQKNSCATAGESCEDKSPPGP 192
P GP + + ++ FPWMK ++ ++ K A + E +
Sbjct: 91 ALPHPPAGPFPEGAEPGVLEEPNRVQLPFPWMKSTKAHA-WKGQWAGGAYAAEPEE---- 145
Query: 193 ASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 252
+KR RTAYT AQL+ELEKEF FN+Y+ RPRRVE+A +LNLTER IKIWFQNRRMK+KK+
Sbjct: 146 -NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKE 204
Query: 253 QKAK---------GILHSPASQSPERS----------PPLGG----AAGHVAYSGQLPPV 289
+ K G + P S PP GG AA A G+LP
Sbjct: 205 EDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPPPPPPGGAVPPAAPVAAREGRLP-- 262
Query: 290 PGLAYDAPSPPAFAKSQP 307
PGL+ +P P + A +P
Sbjct: 263 PGLS-ASPQPSSVAPRRP 279
>gi|24497517 homeobox A5 [Homo sapiens]
Length = 270
Score = 112 bits (280), Expect = 7e-25
Identities = 81/240 (33%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 31 GYGYS--------KTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHK 82
GYGY+ + +G + Y A+A+ + Y A S S P P
Sbjct: 46 GYGYNGMDLSVGRSGSGHFGSGERARSYAASASAAPAEPRYSQPATSTHSPQPDPLPCSA 105
Query: 83 GAELNGSCMRPGTGNSQGGGGGSQPPG----LNSEQQPPQPPPPPPTLPPSSPTNPGGGV 138
A GS G NS G+ ++S + P SS
Sbjct: 106 VAPSPGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTASGAEEDAPASSEQASAQSE 165
Query: 139 PAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVR 198
P+ P P QI+PWM++ + GP KR R
Sbjct: 166 PSPAPPAQP-----------QIYPWMRKLHISHDNIG---------------GPEGKRAR 199
Query: 199 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGI 258
TAYT Q +ELEKEFHFNRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KKD K K +
Sbjct: 200 TAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSM 259
>gi|24497538 homeobox C4 [Homo sapiens]
Length = 264
Score = 112 bits (280), Expect = 7e-25
Identities = 88/247 (35%), Positives = 112/247 (45%), Gaps = 56/247 (22%)
Query: 34 YSKTTDTYGYSTPHQP-YPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMR 92
Y +T ++ G+ HQ YPPP S YP S S
Sbjct: 37 YGRTRES-GFQHHHQELYPPPPPRPS----YPERQYSCTSLQ------------------ 73
Query: 93 PGTGNSQGGG---GGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNA 149
G GNS+G G G P Q +P P SP P PA P+
Sbjct: 74 -GPGNSRGHGPAQAGHHHP--EKSQSLCEPAPLSGASASPSPAPPACSQPA------PDH 124
Query: 150 SSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVEL 209
SS+A+ ++PWMK+ ++ N G KR RTAYT Q++EL
Sbjct: 125 PSSAASKQPIVYPWMKKIHVSTVNPNY-------------NGGEPKRSRTAYTRQQVLEL 171
Query: 210 EKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPER 269
EKEFH+NRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KKD H +
Sbjct: 172 EKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD-------HRLPNTKVRS 224
Query: 270 SPPLGGA 276
+PP G A
Sbjct: 225 APPAGAA 231
>gi|24497540 homeobox C4 [Homo sapiens]
Length = 264
Score = 112 bits (280), Expect = 7e-25
Identities = 88/247 (35%), Positives = 112/247 (45%), Gaps = 56/247 (22%)
Query: 34 YSKTTDTYGYSTPHQP-YPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMR 92
Y +T ++ G+ HQ YPPP S YP S S
Sbjct: 37 YGRTRES-GFQHHHQELYPPPPPRPS----YPERQYSCTSLQ------------------ 73
Query: 93 PGTGNSQGGG---GGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNA 149
G GNS+G G G P Q +P P SP P PA P+
Sbjct: 74 -GPGNSRGHGPAQAGHHHP--EKSQSLCEPAPLSGASASPSPAPPACSQPA------PDH 124
Query: 150 SSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVEL 209
SS+A+ ++PWMK+ ++ N G KR RTAYT Q++EL
Sbjct: 125 PSSAASKQPIVYPWMKKIHVSTVNPNY-------------NGGEPKRSRTAYTRQQVLEL 171
Query: 210 EKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPER 269
EKEFH+NRYL R RR+E+A+ L L+ERQIKIWFQNRRMK+KKD H +
Sbjct: 172 EKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKD-------HRLPNTKVRS 224
Query: 270 SPPLGGA 276
+PP G A
Sbjct: 225 APPAGAA 231
>gi|13375632 homeobox D1 [Homo sapiens]
Length = 328
Score = 110 bits (274), Expect = 3e-24
Identities = 84/228 (36%), Positives = 110/228 (48%), Gaps = 21/228 (9%)
Query: 52 PPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLN 111
P AAA D + GS + L A G GS + T GGG G
Sbjct: 97 PAAAAGGADYGFLGSGPAYDFPGVLGRAADDG----GSHVHYATSAVFSGGGSFLLSGQV 152
Query: 112 SEQQPPQPPPPPPTLPPSSPTNPGG-----GVPAKKPKGGPNASSSSATISKQIFPWMKE 166
+P P P L S+ +PG P PK AS A S F WMK
Sbjct: 153 DYAAFGEPGPFPACLKASADGHPGAFQTASPAPGTYPKSVSPASGLPAAFST--FEWMKV 210
Query: 167 SRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVE 226
R N+ +K A G + SP S +RT +++ QL ELEKEFHFN+YL R RR+E
Sbjct: 211 KR-NASKKGKLAEYGAA----SP----SSAIRTNFSTKQLTELEKEFHFNKYLTRARRIE 261
Query: 227 MANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPPLG 274
+AN L+L + Q+KIWFQNRRMK KK ++ +G+L + +P + P G
Sbjct: 262 IANCLHLNDTQVKIWFQNRRMKQKKRER-EGLLATAIPVAPLQLPLSG 308
>gi|13489077 homeobox A6 [Homo sapiens]
Length = 233
Score = 109 bits (272), Expect = 6e-24
Identities = 79/210 (37%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 48 QPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCM---RPGTGNSQGGGGG 104
+P+P ASSL S C Q S + A E SC + +G S G G
Sbjct: 36 RPFPASYGASSLPDKTYTSPCFYQQSNSVLACNRASYEYGASCFYSDKDLSGASPSGSGK 95
Query: 105 SQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWM 164
+ PG P Q P + G A +G +S ++PWM
Sbjct: 96 QRGPGDYLHFSPEQQ---------YKPDSSSGQGKALHDEGADRKYTSP------VYPWM 140
Query: 165 KESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRR 224
+ + NSCA A G +R R YT Q +ELEKEFHFNRYL R RR
Sbjct: 141 Q-------RMNSCAGAVY--------GSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRR 185
Query: 225 VEMANLLNLTERQIKIWFQNRRMKYKKDQK 254
+E+AN L LTERQIKIWFQNRRMK+KK+ K
Sbjct: 186 IEIANALCLTERQIKIWFQNRRMKWKKENK 215
>gi|4504469 homeobox B5 [Homo sapiens]
Length = 269
Score = 107 bits (267), Expect = 2e-23
Identities = 75/208 (36%), Positives = 102/208 (49%), Gaps = 28/208 (13%)
Query: 53 PAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNS 112
PA A S+CS+ S+P P G + +G+ + + Q S
Sbjct: 77 PAPAQEPRFRQAASSCSL--SSPESLPCTNG-DSHGAKPSASSPSDQATSASSSANFTEI 133
Query: 113 EQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISK--QIFPWMKESRQN 170
++ P SSP+ + + P A+S++A + QIFPWM++ +
Sbjct: 134 DEASASSEPEEAASQLSSPS-------LARAQPEPMATSTAAPEGQTPQIFPWMRKLHIS 186
Query: 171 SKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANL 230
GP KR RTAYT Q +ELEKEFHFNRYL R RR+E+A+
Sbjct: 187 HDMT----------------GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
Query: 231 LNLTERQIKIWFQNRRMKYKKDQKAKGI 258
L L+ERQIKIWFQNRRMK+KKD K K +
Sbjct: 231 LCLSERQIKIWFQNRRMKWKKDNKLKSM 258
>gi|24497526 homeobox B1 [Homo sapiens]
Length = 301
Score = 104 bits (260), Expect = 1e-22
Identities = 92/264 (34%), Positives = 115/264 (43%), Gaps = 48/264 (18%)
Query: 13 PECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTP----HQPYPPPAAASSLDTDYPGSAC 68
P + Q Y + G +GG G S+P + YP S+L +P SA
Sbjct: 32 PPSSAQAVDSYASEGRYGG----------GLSSPAFQQNSGYPAQQPPSTLGVPFPSSAP 81
Query: 69 SIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGG-------GSQPPGLNSEQQP--PQP 119
S APA S P G S+G GG G+Q GL+ P
Sbjct: 82 SGY------APAACSPSYGPSQYYP-LGQSEGDGGYFHPSSYGAQLGGLSDGYGAGGAGP 134
Query: 120 PPPPPTLPPSSPTNPGGGVPA-----KKPKGGPNASSSSATISKQIFPWMKESRQNSKQK 174
P PP PP PA + K P S + T + + F WMK R K
Sbjct: 135 GPYPPQHPPYGNEQTASFAPAYADLLSEDKETPCPSEPN-TPTARTFDWMKVKRNPPKTA 193
Query: 175 NSCATAGESCEDKSPPGPASKR-VRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNL 233
S PG S +RT +T+ QL ELEKEFHFN+YL R RRVE+A L L
Sbjct: 194 KV-----------SEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLEL 242
Query: 234 TERQIKIWFQNRRMKYKKDQKAKG 257
E Q+KIWFQNRRMK KK ++ +G
Sbjct: 243 NETQVKIWFQNRRMKQKKREREEG 266
>gi|11321638 homeobox C5 [Homo sapiens]
Length = 222
Score = 103 bits (257), Expect = 3e-22
Identities = 77/213 (36%), Positives = 100/213 (46%), Gaps = 44/213 (20%)
Query: 65 GSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPP 124
GSA +Q+S + G +L+ + P NS G + P + ++ P
Sbjct: 28 GSASEVQASRY----CYGGLDLSITFPPPAPSNSLHGVDMAANPRAHPDRPACSAAAAPG 83
Query: 125 TLP---PSSPTNPG------------------GGVPAKKPKGGPNASSSSATISKQIFPW 163
P ++P NPG G + ++ + G A S QI+PW
Sbjct: 84 HAPGRDEAAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPW 143
Query: 164 MKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPR 223
M +K S T G KR RT+YT Q +ELEKEFHFNRYL R R
Sbjct: 144 M------TKLHMSHETDG-------------KRSRTSYTRYQTLELEKEFHFNRYLTRRR 184
Query: 224 RVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 256
R+E+AN L L ERQIKIWFQNRRMK+KKD K K
Sbjct: 185 RIEIANNLCLNERQIKIWFQNRRMKWKKDSKMK 217
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 101 bits (252), Expect = 1e-21
Identities = 79/229 (34%), Positives = 99/229 (43%), Gaps = 44/229 (19%)
Query: 41 YGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQG 100
YG S P+ PP A + P +P G G R G G
Sbjct: 54 YGNSAAGFPHAPPQAHAH----------------PHPSPPPSGTGCGG---REGRGQEYF 94
Query: 101 GGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQ- 159
GG P PP P PPPP PP P GG+ G P + +Q
Sbjct: 95 HPGGGSPAAAYQAAPPPPPHPPPPPPPP-----PCGGIACH---GEPAKFYGYDNLQRQP 146
Query: 160 IFPWMKESR--QNSKQKNSCATAGESCE----DKSPP----------GPASKRVRTAYTS 203
IF +E+ Q K+S GE + SP P +R R Y+
Sbjct: 147 IFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSR 206
Query: 204 AQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 252
Q +ELEKEF FN YL R RR+E+++ L LTERQ+KIWFQNRRMK+KK+
Sbjct: 207 FQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE 255
>gi|24497556 homeobox A7 [Homo sapiens]
Length = 230
Score = 100 bits (249), Expect = 3e-21
Identities = 59/133 (44%), Positives = 74/133 (55%), Gaps = 26/133 (19%)
Query: 144 KGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTS 203
K A +A + +I+PWM+ S GP KR R YT
Sbjct: 103 KTDEGALHGAAEANFRIYPWMRSS-----------------------GPDRKRGRQTYTR 139
Query: 204 AQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPA 263
Q +ELEKEFHFNRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K +G A
Sbjct: 140 YQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDEG---PTA 196
Query: 264 SQSPERSPPLGGA 276
+ +PE + P A
Sbjct: 197 AAAPEGAVPSAAA 209
>gi|23503237 homeobox B6 [Homo sapiens]
Length = 224
Score = 99.4 bits (246), Expect = 6e-21
Identities = 53/113 (46%), Positives = 69/113 (61%), Gaps = 15/113 (13%)
Query: 157 SKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFN 216
S ++PWM+ + NSC + S GP+ +R R YT Q +ELEKEFH+N
Sbjct: 124 STPVYPWMQ-------RMNSC--------NSSSFGPSGRRGRQTYTRYQTLELEKEFHYN 168
Query: 217 RYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPER 269
RYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K A + E+
Sbjct: 169 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEK 221
>gi|33457326 GS homeobox 1 [Homo sapiens]
Length = 264
Score = 96.3 bits (238), Expect = 5e-20
Identities = 63/155 (40%), Positives = 87/155 (56%), Gaps = 24/155 (15%)
Query: 112 SEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKG------------GPNASSSSATISKQ 159
S+ P PP P L S P P G P G GP A++++A + +
Sbjct: 65 SQLHGPPGPPALPLLKASFP--PFGSQYCHAPLGRQHSAVSPGVAHGPAAAAAAAALYQT 122
Query: 160 IFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYL 219
+P + + RQ C S + S P+SKR+RTA+TS QL+ELE+EF N YL
Sbjct: 123 SYP-LPDPRQFH-----CI----SVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYL 172
Query: 220 CRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK 254
R RR+E+A LNL+E+Q+KIWFQNRR+K+KK+ K
Sbjct: 173 SRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGK 207
>gi|85068580 homeobox B7 [Homo sapiens]
Length = 217
Score = 95.9 bits (237), Expect = 6e-20
Identities = 74/224 (33%), Positives = 95/224 (42%), Gaps = 52/224 (23%)
Query: 56 ASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQG------------GGG 103
A++L + YP S+ + A P + RPG G G GGG
Sbjct: 7 ANTLFSKYPASSSVFATGA---FPEQTSCAFASNPQRPGYGAGSGASFAASMQGLYPGGG 63
Query: 104 GSQPP----------GLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSS 153
G GL P L P + AK+ + A+ S+
Sbjct: 64 GMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDSAKAAGAKEQRDSDLAAESN 123
Query: 154 ATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEF 213
+I+PWM+ S G KR R YT Q +ELEKEF
Sbjct: 124 F----RIYPWMRSS-----------------------GTDRKRGRQTYTRYQTLELEKEF 156
Query: 214 HFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKG 257
H+NRYL R RR+E+A+ L LTERQIKIWFQNRRMK+KK+ K G
Sbjct: 157 HYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAG 200
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 95.1 bits (235), Expect = 1e-19
Identities = 87/287 (30%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 33 GYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMR 92
G ++T DT GYS+ + P A + + P + AP A +GAE
Sbjct: 126 GEAETNDTNGYSSGGGGHSPSADSGD---EVPDDEDDDEDEAP-ETEAARGAE------- 174
Query: 93 PGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVP-AKKPKGGPNASS 151
++GGGGG G + P T+ ++ P P A+ P GG A
Sbjct: 175 ----EARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAQGPPGGAAAPG 230
Query: 152 SSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEK 211
+ T + K R+ + G + P +R RTA+T QLV LE
Sbjct: 231 GAGTTPQGTATAAKPKRKRT---------GSDSKSGKP-----RRARTAFTYEQLVALEN 276
Query: 212 EFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSP 271
+F RYL R+ +A L+LTE Q+KIWFQNRR K+KK + + S
Sbjct: 277 KFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-----------NPGADTSA 325
Query: 272 PLGGAAGHVAYSGQLPPVP-GLAYDAPSPPAFAKSQPNMYGLAAYTA 317
P GG G +G +P GL+ +PSPP A M+G A Y A
Sbjct: 326 PTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPL--GMHGPAGYPA 370
>gi|5031761 homeobox A1 isoform a [Homo sapiens]
Length = 335
Score = 94.7 bits (234), Expect = 1e-19
Identities = 86/276 (31%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 18 QKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLR 77
Q A Y + L Y +S +YG PY P A D + P
Sbjct: 76 QPATYQTSGNLGVSYSHSSCGPSYGSQNFSAPYSPYALNQEAD---------VSGGYPQC 126
Query: 78 APAHKGAELNGSCMRPGTGNSQGGGGGSQPPGL--NSEQQPPQPPPPPPTLPPSSPTNPG 135
APA L+ ++ + GG P +S Q Q SP +
Sbjct: 127 APAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLSPLHAS 186
Query: 136 GGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASK 195
+ P +S + Q F WMK R K GE P
Sbjct: 187 HQEACRSP-------ASETSSPAQTFDWMKVKRNPPKT----GKVGEYGYLGQP-----N 230
Query: 196 RVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKA 255
VRT +T+ QL ELEKEFHFN+YL R RRVE+A L L E Q+KIWFQNRRMK KK +K
Sbjct: 231 AVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKE 290
Query: 256 KGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPG 291
+ SPA +P + + + S P PG
Sbjct: 291 GLLPISPA--TPPGNDEKAEESSEKSSSSPCVPSPG 324
>gi|121114296 caudal type homeobox 1 [Homo sapiens]
Length = 265
Score = 94.7 bits (234), Expect = 1e-19
Identities = 67/202 (33%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 121 PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATA 180
PPP P +P PG G+ A+ P GGP SS + WM+ S A
Sbjct: 94 PPPDFSPVPAPPGPGPGLLAQ-PLGGPGTPSSPGAQRPTPYEWMRRS---------VAAG 143
Query: 181 GESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 240
G K+ + R YT Q +ELEKEFH++RY+ R+ E+A L LTERQ+KI
Sbjct: 144 GGGGSGKTR---TKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKI 200
Query: 241 WFQNRRMKYKKDQKAKGILHSPASQSPERSPPLGGAAGHVAYSGQLPPVPGLAYD---AP 297
WFQNRR K +K K K Q PP P +A+D P
Sbjct: 201 WFQNRRAKERKVNKKK-------------------------QQQQQPPQPPMAHDITATP 235
Query: 298 SPPAFAKSQPNMYGLAAYTAPL 319
+ P+ P+ L A ++P+
Sbjct: 236 AGPSLGGLCPSNTSLLATSSPM 257
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 94.4 bits (233), Expect = 2e-19
Identities = 67/213 (31%), Positives = 98/213 (46%), Gaps = 40/213 (18%)
Query: 64 PGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGG-----------SQPPGLNS 112
P C++ +S+ + P + GT G GGG +QPPG
Sbjct: 196 PPDGCALGTSSGVPVPGYFRLS-----QAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGF 250
Query: 113 EQQPPQPP--------------PPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATISK 158
+ P PPPPTL S GGG G + +S++ ++
Sbjct: 251 DLPPALASGSADAARKERALDSPPPPTLACGS----GGG------SQGDEEAHASSSAAE 300
Query: 159 QIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRY 218
++ P ES + S +K+S + + ++ R YT Q +ELEKEF FN Y
Sbjct: 301 ELSPAPSESSKASPEKDSLGNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMY 360
Query: 219 LCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
L R RR+E++ ++LT+RQ+KIWFQNRRMK KK
Sbjct: 361 LTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 393
Score = 37.7 bits (86), Expect = 0.020
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 33/136 (24%)
Query: 30 GGYGYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGS 89
GG G + GY Y PPAA D Y +C + + G + N +
Sbjct: 44 GGGGGAGGGGGGGYYAHGGVYLPPAA----DLPYGLQSCGLFPTL--------GGKRNEA 91
Query: 90 CMRPGTGNSQGG------GGGSQPPGL------NSEQQPPQPPPPPPTLPPSSPTNPGGG 137
PG+G GG G G P L + +PP PPPPP P P P
Sbjct: 92 AS-PGSGGGGGGLGPGAHGYGPSPIDLWLDAPRSCRMEPPDGPPPPPQQQPPPPPQP--- 147
Query: 138 VPAKKPKGGPNASSSS 153
P+ P A+S S
Sbjct: 148 -----PQPAPQATSCS 158
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 94.4 bits (233), Expect = 2e-19
Identities = 87/287 (30%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 33 GYSKTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMR 92
G ++T DT GYS+ + P A + + P + AP A +GAE
Sbjct: 529 GEAETNDTNGYSSGGGGHSPSADSGD---EVPDDEDDDEDEAP-ETEAARGAE------- 577
Query: 93 PGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVP-AKKPKGGPNASS 151
++GGGGG G + P T+ ++ P P A P GG A
Sbjct: 578 ----EARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPRENSPVAPGPPGGAAAPG 633
Query: 152 SSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEK 211
+ T + K R+ + G + P +R RTA+T QLV LE
Sbjct: 634 GAGTTPQGTATAAKPKRKRT---------GSDSKSGKP-----RRARTAFTYEQLVALEN 679
Query: 212 EFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSP 271
+F RYL R+ +A L+LTE Q+KIWFQNRR K+KK + + S
Sbjct: 680 KFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-----------NPGADTSA 728
Query: 272 PLGGAAGHVAYSGQLPPVP-GLAYDAPSPPAFAKSQPNMYGLAAYTA 317
P GG G +G +P GL+ +PSPP A M+G A Y A
Sbjct: 729 PTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPL--GMHGPAGYPA 773
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 93.6 bits (231), Expect = 3e-19
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 24/228 (10%)
Query: 54 AAASSLDT-DYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLNS 112
AAA++LD+ PG + APLR + A + + GG + G +S
Sbjct: 50 AAAANLDSAQSPGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAMGYSS 109
Query: 113 --EQQPPQPPPPPPTLPPSSPTNPGGGVPAKKP-KGGPNASSSSATIS-----KQIFPWM 164
+ P P P P ++P+ G + P GP A++++ +S + + WM
Sbjct: 110 PADYHPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWM 169
Query: 165 KESRQNSKQKNSCATAGESCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRR 224
++ Q S G + ++ + R YT Q +ELEKEFH++RY+ R+
Sbjct: 170 RKPAQQS--------LGSQVKTRT-----KDKYRVVYTDHQRLELEKEFHYSRYITIRRK 216
Query: 225 VEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGILHSPASQSPERSPP 272
E+A L L+ERQ+KIWFQNRR K +K K K L Q P + PP
Sbjct: 217 AELAATLGLSERQVKIWFQNRRAKERKINKKK--LQQQQQQQPPQPPP 262
Score = 36.6 bits (83), Expect = 0.045
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 113 EQQPPQPPPPPPTLPPSSPTNPGGGVP 139
+QQPPQPPPPPP PP P VP
Sbjct: 254 QQQPPQPPPPPPQ-PPQPQPGPLRSVP 279
Score = 31.2 bits (69), Expect = 1.9
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 113 EQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGGPNASSSSATI 156
+QQ QPP PPP PP P P G P+ SS A++
Sbjct: 251 QQQQQQPPQPPP--PPPQPPQPQPGPLRSVPEPLSPVSSLQASV 292
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,302,110
Number of Sequences: 37866
Number of extensions: 1624952
Number of successful extensions: 31064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 1198
Number of HSP's that attempted gapping in prelim test: 12326
Number of HSP's gapped (non-prelim): 11447
length of query: 432
length of database: 18,247,518
effective HSP length: 105
effective length of query: 327
effective length of database: 14,271,588
effective search space: 4666809276
effective search space used: 4666809276
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.