Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 17402909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]
(588 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17402909 tripartite motif protein TRIM29 [Homo sapiens] 1195 0.0
gi|48255913 tripartite motif-containing 16 [Homo sapiens] 145 1e-34
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 115 1e-25
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 113 6e-25
gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo ... 99 1e-20
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 80 5e-15
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 80 5e-15
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 80 5e-15
gi|15208660 tripartite motif protein 21 [Homo sapiens] 76 1e-13
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 74 5e-13
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 73 8e-13
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 73 8e-13
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 73 8e-13
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 73 8e-13
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 73 8e-13
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 72 1e-12
gi|223890259 midline 2 isoform 2 [Homo sapiens] 71 2e-12
gi|223890257 midline 2 isoform 1 [Homo sapiens] 71 2e-12
gi|148833499 midline 1 [Homo sapiens] 71 3e-12
gi|4557753 midline 1 [Homo sapiens] 71 3e-12
gi|15451852 midline 1 [Homo sapiens] 71 3e-12
gi|148596968 tripartite motif-containing 8 [Homo sapiens] 69 9e-12
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 68 3e-11
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 67 6e-11
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 67 6e-11
gi|28195390 tripartite motif-containing 42 [Homo sapiens] 65 1e-10
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 65 2e-10
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 62 1e-09
gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens] 62 2e-09
gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens] 62 2e-09
>gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]
Length = 588
Score = 1195 bits (3091), Expect = 0.0
Identities = 588/588 (100%), Positives = 588/588 (100%)
Query: 1 MEAADASRSNGSSPEARDARSPSGPSGSLENGTKADGKDAKTTNGHGGEAAEGKSLGSAL 60
MEAADASRSNGSSPEARDARSPSGPSGSLENGTKADGKDAKTTNGHGGEAAEGKSLGSAL
Sbjct: 1 MEAADASRSNGSSPEARDARSPSGPSGSLENGTKADGKDAKTTNGHGGEAAEGKSLGSAL 60
Query: 61 KPGEGRSALFAGNEWRRPIIQFVESGDDKNSNYFSMDSMEGKRSPYAGLQLGAAKKPPVT 120
KPGEGRSALFAGNEWRRPIIQFVESGDDKNSNYFSMDSMEGKRSPYAGLQLGAAKKPPVT
Sbjct: 61 KPGEGRSALFAGNEWRRPIIQFVESGDDKNSNYFSMDSMEGKRSPYAGLQLGAAKKPPVT 120
Query: 121 FAEKGELRKSIFSESRKPTVSIMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK 180
FAEKGELRKSIFSESRKPTVSIMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK
Sbjct: 121 FAEKGELRKSIFSESRKPTVSIMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK 180
Query: 181 QKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPVHGKTMELFCQTDQ 240
QKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPVHGKTMELFCQTDQ
Sbjct: 181 QKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPVHGKTMELFCQTDQ 240
Query: 241 TCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIK 300
TCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIK
Sbjct: 241 TCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIK 300
Query: 301 SFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDERAKVLHED 360
SFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDERAKVLHED
Sbjct: 301 SFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDERAKVLHED 360
Query: 361 KQTREQLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVC 420
KQTREQLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVC
Sbjct: 361 KQTREQLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVC 420
Query: 421 MRHVEKMCKADLSRNFIERNHMENGGDHRYVNNYTNSFGGEWSAPDTMKRYSMYLTPKGG 480
MRHVEKMCKADLSRNFIERNHMENGGDHRYVNNYTNSFGGEWSAPDTMKRYSMYLTPKGG
Sbjct: 421 MRHVEKMCKADLSRNFIERNHMENGGDHRYVNNYTNSFGGEWSAPDTMKRYSMYLTPKGG 480
Query: 481 VRTSYQPSSPGRFTKETTQKNFNNLYGTKGNYTSRVWEYSSSIQNSDNDLPVVQGSSSFS 540
VRTSYQPSSPGRFTKETTQKNFNNLYGTKGNYTSRVWEYSSSIQNSDNDLPVVQGSSSFS
Sbjct: 481 VRTSYQPSSPGRFTKETTQKNFNNLYGTKGNYTSRVWEYSSSIQNSDNDLPVVQGSSSFS 540
Query: 541 LKGYPSLMRSQSPKAQPQTWKSGKQTMLSHYRPFYVNKGNGIGSNEAP 588
LKGYPSLMRSQSPKAQPQTWKSGKQTMLSHYRPFYVNKGNGIGSNEAP
Sbjct: 541 LKGYPSLMRSQSPKAQPQTWKSGKQTMLSHYRPFYVNKGNGIGSNEAP 588
>gi|48255913 tripartite motif-containing 16 [Homo sapiens]
Length = 564
Score = 145 bits (366), Expect = 1e-34
Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 3/214 (1%)
Query: 169 EEVLCDSCIGNKQ--KAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCP 226
+EVLCD C+ + + KAVKSCL C ++CE HL+PH + H L EP++D R CP
Sbjct: 73 KEVLCDFCLDDTRRVKAVKSCLTCMVNYCEEHLQPHQVNIKLQSHLLTEPVKDHNWRYCP 132
Query: 227 VHGKTMELFCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIE 286
H + FC DQ CIC C QEH H+ V+++ A+ +KE EL + L+ K+ E
Sbjct: 133 AHHSPLSAFCCPDQQCICQDCC-QEHSGHTIVSLDAARRDKEAELQCTQLDLERKLKLNE 191
Query: 287 DEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVI 346
+ + Q + + + KA+ E F +L+ + K + V LE++EQ A+ Q I
Sbjct: 192 NAISRLQANQKSVLVSVSEVKAVAEMQFGELLAAVRKAQANVMLFLEEKEQAALSQANGI 251
Query: 347 MDALDERAKVLHEDKQTREQLHSISDSVLFLQEF 380
L+ R+ + + KQ E++ +IS++V FL+E+
Sbjct: 252 KAHLEYRSAEMEKSKQELERMAAISNTVQFLEEY 285
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 115 bits (288), Expect = 1e-25
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 14/257 (5%)
Query: 166 SGSEEVLCDSCIGNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKC 225
S + +V CD C+ K+ AVK+CLVC ASFC+ HL+PH + AF+DH L P+RD RKC
Sbjct: 100 SPNAQVACDHCL--KEAAVKTCLVCMASFCQEHLQPHFDSPAFQDHPLQPPVRDLLRRKC 157
Query: 226 PVHGKTMELFCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEI 285
H + E FC CIC++C+ EHK S ++ +A A+ E L + +L + +I
Sbjct: 158 SQHNRLREFFCPEHSECICHICLV-EHKTCSPASLSQASADLEATL---RHKLTVMYSQI 213
Query: 286 EDEAEKWQKEKDRIKS--FTTNEKA-ILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQ 342
+ ++R + T N K L+Q + ++ L+ + +++ E+ +
Sbjct: 214 NGASRALDDVRNRQQDVRMTANRKVEQLQQEYTEMKALLDASETTSTRKIKEEEKRVNSK 273
Query: 343 VKVIMDALDERAKVLHEDKQTREQLHSISDSVLFLQEFGALMSNYSLP---PPLPTYHVL 399
I L ++ + K+ EQ + D FL++ L + P P + H L
Sbjct: 274 FDTIYQILLKKKSEIQTLKEEIEQSLTKRDEFEFLEKASKLRGISTKPVYIPEVELNHKL 333
Query: 400 LEGEGLGQSLGNFKDDL 416
+ +G+ QS + K++L
Sbjct: 334 I--KGIHQSTIDLKNEL 348
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 113 bits (282), Expect = 6e-25
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 2/219 (0%)
Query: 166 SGSEEVLCDSCI-GNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARK 224
+G E V CD+C G A SCL C ASFC HL PH A R H+L+ P+R E
Sbjct: 122 AGEEPVRCDACPEGAALPAALSCLSCLASFCPAHLGPHERSPALRGHRLVPPLRRLEESL 181
Query: 225 CPVHGKTMELFCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIE 284
CP H + +E +C+ ++ C+C C QEH+ H V +E+ +A +E E S ++ ++ E
Sbjct: 182 CPRHLRPLERYCRAERVCLCEACAAQEHRGHELVPLEQERALQEAEQSKVLSAVEDRMDE 241
Query: 285 IEDEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVK 344
+ + ++ IKS E+ + + F D L+ + +V +E+ E + + +
Sbjct: 242 LGAGIAQSRRTVALIKSAAVAERERVSRLFADAAAALQGFQTQVLGFIEEGEAAMLGRSQ 301
Query: 345 VIMDALDERAKVLHEDKQTREQLHSISDSVLFLQEFGAL 383
+ +E+ L +Q Q+ +DSV FLQE AL
Sbjct: 302 GDLRRQEEQRSRLSRARQNLSQVPE-ADSVSFLQELLAL 339
>gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo
sapiens]
Length = 282
Score = 98.6 bits (244), Expect = 1e-20
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 169 EEVLCDSCIGNKQ--KAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCP 226
+EVLCD C+ + + KAVKSCL C ++CE HL+PH + H L EP++D R CP
Sbjct: 73 KEVLCDFCLDDTRRVKAVKSCLTCMVNYCEEHLQPHQVNIKLQSHLLTEPVKDHNWRYCP 132
Query: 227 VHGKTMELFCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKE 268
H + FC DQ CIC C QEH H+ V+++ A+ +KE
Sbjct: 133 AHHSPLSAFCCPDQQCICQDCC-QEHSGHTIVSLDAARRDKE 173
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 80.1 bits (196), Expect = 5e-15
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 174 DSCIGNKQKAVKSCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFEARKCPVHGK 230
+S IG Q+ +SC VCQ S+ +L+P HL R ++ L P + +A C HG+
Sbjct: 45 ESVIG--QEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGE 102
Query: 231 TMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAE-----KETELSLQKEQLQLKIIE 284
++LFCQ D IC+LC QEH+ H T VEE E +E+ L+ E+ + + +
Sbjct: 103 KLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLT 162
Query: 285 --IEDEAEKW----QKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQD 338
I ++ W + E+ RI++ + IL++ + ++ LE+++++ +E+ E D
Sbjct: 163 AFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAEND 222
Query: 339 AVDQVKVIMDALDERAKVLHEDKQTREQLHSISDSVLFLQEFGALMSNYSLPPPL 393
V Q + + + + + + T E L +SD V EF L +LP L
Sbjct: 223 LVHQTQSLRELISDLER--RCQGSTMELLQDVSD-VTERSEFWTLRKPEALPTKL 274
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 80.1 bits (196), Expect = 5e-15
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 174 DSCIGNKQKAVKSCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFEARKCPVHGK 230
+S IG Q+ +SC VCQ S+ +L+P HL R ++ L P + +A C HG+
Sbjct: 73 ESVIG--QEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGE 130
Query: 231 TMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAE-----KETELSLQKEQLQLKIIE 284
++LFCQ D IC+LC QEH+ H T VEE E +E+ L+ E+ + + +
Sbjct: 131 KLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLT 190
Query: 285 --IEDEAEKW----QKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQD 338
I ++ W + E+ RI++ + IL++ + ++ LE+++++ +E+ E D
Sbjct: 191 AFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAEND 250
Query: 339 AVDQVKVIMDALDERAKVLHEDKQTREQLHSISDSVLFLQEFGALMSNYSLPPPL 393
V Q + + + + + + T E L +SD V EF L +LP L
Sbjct: 251 LVHQTQSLRELISDLER--RCQGSTMELLQDVSD-VTERSEFWTLRKPEALPTKL 302
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 80.1 bits (196), Expect = 5e-15
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 174 DSCIGNKQKAVKSCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFEARKCPVHGK 230
+S IG Q+ +SC VCQ S+ +L+P HL R ++ L P + +A C HG+
Sbjct: 73 ESVIG--QEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGE 130
Query: 231 TMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAE-----KETELSLQKEQLQLKIIE 284
++LFCQ D IC+LC QEH+ H T VEE E +E+ L+ E+ + + +
Sbjct: 131 KLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLT 190
Query: 285 --IEDEAEKW----QKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQD 338
I ++ W + E+ RI++ + IL++ + ++ LE+++++ +E+ E D
Sbjct: 191 AFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAEND 250
Query: 339 AVDQVKVIMDALDERAKVLHEDKQTREQLHSISDSVLFLQEFGALMSNYSLPPPL 393
V Q + + + + + + T E L +SD V EF L +LP L
Sbjct: 251 LVHQTQSLRELISDLER--RCQGSTMELLQDVSD-VTERSEFWTLRKPEALPTKL 302
Score = 72.8 bits (177), Expect = 8e-13
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 172 LCDSCI--GNKQKAVK-----SCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFE 221
LC +CI NK+ SC VC S+ HL+ HL R ++ L P +
Sbjct: 388 LCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK 447
Query: 222 ARKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQL 280
C HG+ + LFC+ D+ IC+LC QEH+ H TV EE E + +L ++L+
Sbjct: 448 RDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKK 507
Query: 281 KIIEIEDEAEKWQ----KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE 336
+ E+EAEK + +EK K E+ ++ F L L +++ LE+ E
Sbjct: 508 E----EEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEE 563
Query: 337 QDAVDQVKVIMDALDERAKVLHE---DKQTREQLHSISDSVLFLQEFGALM 384
+ +D+ D L ++ +++ E D + R Q ++ LQ+ +M
Sbjct: 564 KKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTME----LLQDMSGIM 610
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 75.9 bits (185), Expect = 1e-13
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 173 CDSCIGNKQKAVKS-CLVCQASFCELHLKPHLEGAAFRDH--QLLEPIRD-FEARKCPVH 228
C CI K S C VC+ F +L+P+ + A ++ ++ + R+ + +C VH
Sbjct: 36 CQECISQVGKGGGSVCPVCRQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGERCAVH 95
Query: 229 GKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSL------QKEQLQLK 281
G+ + LFC+ D +C++C ++H++H+ V +EEA E + +L + +K++L K
Sbjct: 96 GERLHLFCEKDGKALCWVCAQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEK 155
Query: 282 I-IEIEDEAEKWQK----EKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE 336
+ +EI + W+K +K RI + +K L + + +++LEK + E L ++E
Sbjct: 156 LEVEIAIKRADWKKTVETQKSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKE 215
Query: 337 QDAVDQVKVIMDALDERAKVLH 358
Q + + + + E + H
Sbjct: 216 AKLAQQSQALQELISELDRRCH 237
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 73.6 bits (179), Expect = 5e-13
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 32/206 (15%)
Query: 173 CDSCI-GNKQKAV-----KSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDF----EA 222
C +C+ N +K++ SC VC+ S+ +++P+ A L+E +R+ E
Sbjct: 35 CQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVA-----NLVEKLREVKLSPEG 89
Query: 223 RK---CPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQL 278
+K C HG+ + LFCQ D IC+LC QEH+ H T EE E + +L E L
Sbjct: 90 QKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFPTEEVAQEYQVKLQAALEML 149
Query: 279 QLKIIEIE----DEAEKWQKEKDRIKSFTTNEKAILEQNFRDL--------VRDLEKQKE 326
+ K E E D E+ K +I+ TN A EQ RD+ +++LEK++E
Sbjct: 150 RQKQQEAEELEADIREEKASWKTQIQYDKTNVLADFEQ-LRDILDWEESNELQNLEKEEE 208
Query: 327 EVRAALEQREQDAVDQVKVIMDALDE 352
++ +L E + V Q + + + + +
Sbjct: 209 DILKSLTNSETEMVQQTQSLRELISD 234
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 72.8 bits (177), Expect = 8e-13
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 172 LCDSCI--GNKQKAVK-----SCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFE 221
LC +CI NK+ SC VC S+ HL+ HL R ++ L P +
Sbjct: 34 LCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK 93
Query: 222 ARKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQL 280
C HG+ + LFC+ D+ IC+LC QEH+ H TV EE E + +L ++L+
Sbjct: 94 RDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKK 153
Query: 281 KIIEIEDEAEKWQ----KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE 336
+ E+EAEK + +EK K E+ ++ F L L +++ LE+ E
Sbjct: 154 E----EEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEE 209
Query: 337 QDAVDQVKVIMDALDERAKVLHE---DKQTREQLHSISDSVLFLQEFGALM 384
+ +D+ D L ++ +++ E D + R Q ++ LQ+ +M
Sbjct: 210 KKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTME----LLQDMSGIM 256
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 72.8 bits (177), Expect = 8e-13
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 172 LCDSCI--GNKQKAVK-----SCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFE 221
LC +CI NK+ SC VC S+ HL+ HL R ++ L P +
Sbjct: 34 LCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK 93
Query: 222 ARKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQL 280
C HG+ + LFC+ D+ IC+LC QEH+ H TV EE E + +L ++L+
Sbjct: 94 RDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKK 153
Query: 281 KIIEIEDEAEKWQ----KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE 336
+ E+EAEK + +EK K E+ ++ F L L +++ LE+ E
Sbjct: 154 E----EEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEE 209
Query: 337 QDAVDQVKVIMDALDERAKVLHE---DKQTREQLHSISDSVLFLQEFGALM 384
+ +D+ D L ++ +++ E D + R Q ++ LQ+ +M
Sbjct: 210 KKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTME----LLQDMSGIM 256
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 72.8 bits (177), Expect = 8e-13
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 172 LCDSCI--GNKQKAVK-----SCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFE 221
LC +CI NK+ SC VC S+ HL+ HL R ++ L P +
Sbjct: 34 LCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK 93
Query: 222 ARKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQL 280
C HG+ + LFC+ D+ IC+LC QEH+ H TV EE E + +L ++L+
Sbjct: 94 RDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKK 153
Query: 281 KIIEIEDEAEKWQ----KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE 336
+ E+EAEK + +EK K E+ ++ F L L +++ LE+ E
Sbjct: 154 E----EEEAEKLEADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEE 209
Query: 337 QDAVDQVKVIMDALDERAKVLHE---DKQTREQLHSISDSVLFLQEFGALM 384
+ +D+ D L ++ +++ E D + R Q ++ LQ+ +M
Sbjct: 210 KKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTME----LLQDMSGIM 256
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 72.8 bits (177), Expect = 8e-13
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 32/206 (15%)
Query: 173 CDSCI-GNKQKAV-----KSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDF----EA 222
C +C+ N +K++ SC VC+ S+ +++P+ A ++E +R+ E
Sbjct: 35 CQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVA-----NIVEKLREVKLSPEG 89
Query: 223 RK---CPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQL 278
+K C HG+ + LFCQ D IC+LC QEH+ H T EE E + +L E L
Sbjct: 90 QKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAQEYQVKLQAALEML 149
Query: 279 QLKIIEIE----DEAEKWQKEKDRIKSFTTNEKAILEQNFRDL--------VRDLEKQKE 326
+ K E E D E+ K +I+ TN A EQ RD+ +++LEK++E
Sbjct: 150 RQKQQEAEELEADIREEKASWKTQIQYDKTNVLADFEQ-LRDILDWEESNELQNLEKEEE 208
Query: 327 EVRAALEQREQDAVDQVKVIMDALDE 352
++ +L E + V Q + + + + +
Sbjct: 209 DILKSLTNSETEMVQQTQSLRELISD 234
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 72.8 bits (177), Expect = 8e-13
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 32/206 (15%)
Query: 173 CDSCI-GNKQKAV-----KSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDF----EA 222
C +C+ N +K++ SC VC+ S+ +++P+ A ++E +R+ E
Sbjct: 35 CQACLTANHKKSMLDKGESSCPVCRISYQPENIRPNRHVA-----NIVEKLREVKLSPEG 89
Query: 223 RK---CPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQL 278
+K C HG+ + LFCQ D IC+LC QEH+ H T EE E + +L E L
Sbjct: 90 QKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRGHHTFLTEEVAQEYQVKLQAALEML 149
Query: 279 QLKIIEIE----DEAEKWQKEKDRIKSFTTNEKAILEQNFRDL--------VRDLEKQKE 326
+ K E E D E+ K +I+ TN A EQ RD+ +++LEK++E
Sbjct: 150 RQKQQEAEELEADIREEKASWKTQIQYDKTNVLADFEQ-LRDILDWEESNELQNLEKEEE 208
Query: 327 EVRAALEQREQDAVDQVKVIMDALDE 352
++ +L E + V Q + + + + +
Sbjct: 209 DILKSLTNSETEMVQQTQSLRELISD 234
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 72.4 bits (176), Expect = 1e-12
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 173 CDSCIGNKQK-------AVKSCLVCQASFCELHLKP--HLEGAAFRDHQL-LEPIRDFEA 222
C +CI K K SC VCQ F +L+P HL R ++ + P +
Sbjct: 35 CQACITAKIKESVIISRGESSCPVCQTRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKR 94
Query: 223 RKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLK 281
C HGK +++FC+ D IC++C + QEH+ H T + E E + +L + ++L +
Sbjct: 95 DVCEHHGKKLQIFCKEDGKVICWVCELSQEHQGHQTFRINEVVKECQEKLQVALQRLIKE 154
Query: 282 IIEIEDEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVD 341
E E + ++E+ K++ E+ + + F ++ L+ +++ LE+ E + +D
Sbjct: 155 DQEAEKLEDDIRQERTAWKNYIQIERQKILKGFNEMRVILDNEEQRELQKLEEGEVNVLD 214
Query: 342 QVKVIMDALDER---AKVLHEDKQTR 364
+ D L ++ A L D Q R
Sbjct: 215 NLAAATDQLVQQRQDASTLISDLQRR 240
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 71.2 bits (173), Expect = 2e-12
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 129 KSIFSESRKPTVS-IMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNKQK-AVKS 186
++I +K +VS P E+RR R T + SE + C C + + AVK+
Sbjct: 100 QNIIDRFQKASVSGPNSPSESRRERTYRPTTAM------SSERIACQFCEQDPPRDAVKT 153
Query: 187 CLVCQASFCELHLK-PHLEGAAFRDHQLLEPIRDFEAR--KCPVH-GKTMELFCQTDQTC 242
C+ C+ S+C+ L+ H F H+L+EP+ D R C H + + ++C +D
Sbjct: 154 CITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQL 213
Query: 243 ICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKS 301
IC LC + H++H ++ + + + L + L + E+E++ K + +++
Sbjct: 214 ICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEV 273
Query: 302 FTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE----QDAVDQVKVIMDALDERAKVL 357
T +A L + +LV ++++K+ + +++ + + QV L+ ++
Sbjct: 274 NTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLI 333
Query: 358 HEDKQTREQLHSISDSVLFLQ 378
++ E + +D FLQ
Sbjct: 334 NQ----AEHILKENDQARFLQ 350
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 71.2 bits (173), Expect = 2e-12
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 129 KSIFSESRKPTVS-IMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNKQK-AVKS 186
++I +K +VS P E+RR R T + SE + C C + + AVK+
Sbjct: 100 QNIIDRFQKASVSGPNSPSESRRERTYRPTTAM------SSERIACQFCEQDPPRDAVKT 153
Query: 187 CLVCQASFCELHLK-PHLEGAAFRDHQLLEPIRDFEAR--KCPVH-GKTMELFCQTDQTC 242
C+ C+ S+C+ L+ H F H+L+EP+ D R C H + + ++C +D
Sbjct: 154 CITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQL 213
Query: 243 ICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKS 301
IC LC + H++H ++ + + + L + L + E+E++ K + +++
Sbjct: 214 ICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEV 273
Query: 302 FTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQRE----QDAVDQVKVIMDALDERAKVL 357
T +A L + +LV ++++K+ + +++ + + QV L+ ++
Sbjct: 274 NTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLI 333
Query: 358 HEDKQTREQLHSISDSVLFLQ 378
++ E + +D FLQ
Sbjct: 334 NQ----AEHILKENDQARFLQ 350
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 70.9 bits (172), Expect = 3e-12
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 129 KSIFSESRKPTVS-IMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK-QKAVKS 186
++I +K +VS P ETRR A+T + +E+VLC C + Q AVK+
Sbjct: 80 QNIIDRFQKASVSGPNSPSETRRERAFDANT------MTSAEKVLCQFCDQDPAQDAVKT 133
Query: 187 CLVCQASFCELHLK-PHLEGAAFRDHQLLEPIRDFEAR--KCPVH-GKTMELFCQTDQTC 242
C+ C+ S+C+ LK H F H+L+EPI D R C H + + ++C TD
Sbjct: 134 CVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEDEKVNMYCVTDDQL 193
Query: 243 ICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKS 301
IC LC + H++H + E + + L L + E+E K + ++
Sbjct: 194 ICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEV 253
Query: 302 FTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQ----REQDAVDQVKVIMDALDERAKVL 357
+ ++A L + L+ ++++++ + +++ R + Q+ ++ A ++
Sbjct: 254 NASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLI 313
Query: 358 HEDKQTREQLHSISDSVLFLQ 378
+ + + ++ +D FLQ
Sbjct: 314 SQAEHSLKE----NDHARFLQ 330
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 70.9 bits (172), Expect = 3e-12
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 129 KSIFSESRKPTVS-IMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK-QKAVKS 186
++I +K +VS P ETRR A+T + +E+VLC C + Q AVK+
Sbjct: 80 QNIIDRFQKASVSGPNSPSETRRERAFDANT------MTSAEKVLCQFCDQDPAQDAVKT 133
Query: 187 CLVCQASFCELHLK-PHLEGAAFRDHQLLEPIRDFEAR--KCPVH-GKTMELFCQTDQTC 242
C+ C+ S+C+ LK H F H+L+EPI D R C H + + ++C TD
Sbjct: 134 CVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEDEKVNMYCVTDDQL 193
Query: 243 ICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKS 301
IC LC + H++H + E + + L L + E+E K + ++
Sbjct: 194 ICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEV 253
Query: 302 FTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQ----REQDAVDQVKVIMDALDERAKVL 357
+ ++A L + L+ ++++++ + +++ R + Q+ ++ A ++
Sbjct: 254 NASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLI 313
Query: 358 HEDKQTREQLHSISDSVLFLQ 378
+ + + ++ +D FLQ
Sbjct: 314 SQAEHSLKE----NDHARFLQ 330
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 70.9 bits (172), Expect = 3e-12
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 21/261 (8%)
Query: 129 KSIFSESRKPTVS-IMEPGETRRNSYPRADTGLFSRSKSGSEEVLCDSCIGNK-QKAVKS 186
++I +K +VS P ETRR A+T + +E+VLC C + Q AVK+
Sbjct: 80 QNIIDRFQKASVSGPNSPSETRRERAFDANT------MTSAEKVLCQFCDQDPAQDAVKT 133
Query: 187 CLVCQASFCELHLK-PHLEGAAFRDHQLLEPIRDFEAR--KCPVH-GKTMELFCQTDQTC 242
C+ C+ S+C+ LK H F H+L+EPI D R C H + + ++C TD
Sbjct: 134 CVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEDEKVNMYCVTDDQL 193
Query: 243 ICYLC-MFQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKS 301
IC LC + H++H + E + + L L + E+E K + ++
Sbjct: 194 ICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEV 253
Query: 302 FTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQ----REQDAVDQVKVIMDALDERAKVL 357
+ ++A L + L+ ++++++ + +++ R + Q+ ++ A ++
Sbjct: 254 NASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLI 313
Query: 358 HEDKQTREQLHSISDSVLFLQ 378
+ + + ++ +D FLQ
Sbjct: 314 SQAEHSLKE----NDHARFLQ 330
>gi|148596968 tripartite motif-containing 8 [Homo sapiens]
Length = 551
Score = 69.3 bits (168), Expect = 9e-12
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 21/181 (11%)
Query: 183 AVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPVHGKTMELFCQTDQTC 242
A K CL C+A C+ H++ HL+ + LL D A CP H C+ +Q
Sbjct: 103 AQKVCLRCEAPCCQSHVQTHLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVA 162
Query: 243 ICYLCMFQE--HKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIK 300
+C C + H+ HS VE + E L Q+++L+ + +IED+ K +
Sbjct: 163 VCQYCCYYSGAHQGHSVCDVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLE------- 215
Query: 301 SFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDE-RAKVLHE 359
++K ++E+ L KEEVR E+ Q + ++ ++ LD+ +AK E
Sbjct: 216 ----SDKRLVEEKVNQL-------KEEVRLQYEKLHQLLDEDLRQTVEVLDKAQAKFCSE 264
Query: 360 D 360
+
Sbjct: 265 N 265
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 67.8 bits (164), Expect = 3e-11
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 169 EEVLCDSCIGNKQKAVKSCLVCQASFCELHLK---------------PHLEGAAFRDHQL 213
E++ C C+G Q V L C +FC ++ P +GA R +
Sbjct: 8 EKLTCAICLGLYQDPVT--LPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNVA 65
Query: 214 LE---------PIRD---------FEARKCPVHGKTMELFCQTDQTCICYLCMFQEHKNH 255
L P RD A +CP HG+ +ELFC+T+ C+C +C +E + H
Sbjct: 66 LSGVLEVVRAGPARDPGPDPGPGPDPAARCPRHGRPLELFCRTEGRCVCSVCTVRECRLH 125
Query: 256 STVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKSFTTNEKAILEQNFR 315
++ + ++E +L E Q + + E + + +K+ +I++ + + F
Sbjct: 126 ERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILASWVSGKFS 185
Query: 316 DLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDERAK-VLHEDKQTREQLHSISDSV 374
L++ LE Q ++E + A+ Q + L + V + RE L + D
Sbjct: 186 SLLQALEIQHTTALRSIEVAKTQALAQARDEEQRLRVHLEAVARHGCRIRELLEQV-DEQ 244
Query: 375 LFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVC 420
FLQE L P PL L E Q LG+ K L +C
Sbjct: 245 TFLQESQLLQP----PGPLGPLTPLQWDE--DQQLGDLKQLLSRLC 284
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 66.6 bits (161), Expect = 6e-11
Identities = 42/179 (23%), Positives = 90/179 (50%), Gaps = 7/179 (3%)
Query: 173 CDSCIGNKQKAVKS---CLVCQASFCELHLKPHLE-GAAFRDHQLLEPIRDF--EARKCP 226
C +CI + ++ C VC+ + L+P+ + G+ + L+ ++ + CP
Sbjct: 49 CKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCP 108
Query: 227 VHGKTMELFCQTDQTCICYLCMFQE-HKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEI 285
H + + LFC DQ +C +C H+ H+ V +++A E + +L E L+ K+ EI
Sbjct: 109 QHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEI 168
Query: 286 EDEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVK 344
+K+ +K + + + + F +L R L+++++ + + LE+ EQD + +++
Sbjct: 169 TRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLR 227
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 66.6 bits (161), Expect = 6e-11
Identities = 42/179 (23%), Positives = 90/179 (50%), Gaps = 7/179 (3%)
Query: 173 CDSCIGNKQKAVKS---CLVCQASFCELHLKPHLE-GAAFRDHQLLEPIRDF--EARKCP 226
C +CI + ++ C VC+ + L+P+ + G+ + L+ ++ + CP
Sbjct: 49 CKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCP 108
Query: 227 VHGKTMELFCQTDQTCICYLCMFQE-HKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEI 285
H + + LFC DQ +C +C H+ H+ V +++A E + +L E L+ K+ EI
Sbjct: 109 QHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEI 168
Query: 286 EDEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVK 344
+K+ +K + + + + F +L R L+++++ + + LE+ EQD + +++
Sbjct: 169 TRCKSSEEKKPGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLR 227
>gi|28195390 tripartite motif-containing 42 [Homo sapiens]
Length = 723
Score = 65.5 bits (158), Expect = 1e-10
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 56/287 (19%)
Query: 163 RSKSGSEEVLCDSCIGNKQKAVKSCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEA 222
R S +LC C N++ A K C+ C+ + C LK A +DH ++ + +
Sbjct: 228 RFDRSSGPILCQVC-RNRRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQD 286
Query: 223 RKCPVHGKTMEL--FCQTDQTCICYLCMFQEHKNHSTVTVEEAKAEKETEL--------- 271
K +H + + +C+ D +C C F H H T+++ +A +E+ L
Sbjct: 287 EKICIHHPSSRIIEYCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKA 346
Query: 272 ---SLQKEQLQLKIIEIEDEAEKWQKEKD------RIKSFTTNEKAILEQNFRDLVRDLE 322
+ + ++ I++ +A+K K K+ +++S ++ I+ + +L +
Sbjct: 347 VRYEIDNDLMEFNILKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQ 406
Query: 323 KQKEEV------------------RAALEQREQDA-VDQVKVIMDALDERAKVLHE-DKQ 362
K+ E+ + AL++ Q A + K+++D +++ + + D Q
Sbjct: 407 KEIEKYVYVTTMKVNEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQ 466
Query: 363 TREQLHSISDSVLFLQEFGALM-------------SNYSLPPPLPTY 396
R LHSI+ L E + + S SLP P P +
Sbjct: 467 LR--LHSINYVPLDFVELSSAIHELFPTGPKKVRSSGDSLPSPYPVH 511
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 65.1 bits (157), Expect = 2e-10
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 161 FSRSKSGSEEVLCDSCIGNKQKAVKSCLVCQASFCELHLKPHLE-GAAFRDHQLLEPIRD 219
+ ++ + ++CD C Q++ KSC+ C AS+C K H G H+ + P +
Sbjct: 145 YRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGPTTN 204
Query: 220 FEAR--KCPVH-GKTMELFCQTDQTCICYLC-MFQEHKNHSTVTVEEA------KAEKET 269
F + CP H + + ++C+ + +C+LC + H NH T+ A K K+
Sbjct: 205 FRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDI 264
Query: 270 ELSLQKE-QLQLKIIEIEDEAEKWQKEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEV 328
+ + KE Q++ +I E+ ++ + +R K E+AI +F L LE++K V
Sbjct: 265 DYLIGKESQVKSQISELNLLMKETECNGERAK-----EEAI--THFEKLFEVLEERKSSV 317
Query: 329 RAALEQREQDAVDQVKVIMD 348
A++ ++ +D+ + M+
Sbjct: 318 LKAIDSSKKLRLDKFQTQME 337
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 62.4 bits (150), Expect = 1e-09
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 169 EEVLCDSCIGNKQKAVKS------CLVCQASFCE--------LHLKPHLEG----AAFRD 210
E+ C C+ Q+ V CL C + FCE ++ P G + FR
Sbjct: 12 EDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQCRGPFRPSGFRP 71
Query: 211 HQ----LLEPIRDFE------ARKCPVHGKTMELFCQTDQTCICYLC-MFQEHKNHSTVT 259
++ L+E +R AR+C HG+ + FC+ D+ +C++C EH+ H T
Sbjct: 72 NRQLAGLVESVRRLGLGAGPGARRCARHGEDLSRFCEEDEAALCWVCDAGPEHRTHRTAP 131
Query: 260 VEEAKAEKETELSLQKEQLQLKIIE-IEDEA----------EKWQKEKDRIKSFTTNEKA 308
++EA + +L + E ++ ++ + + EA EK + ++ R + +
Sbjct: 132 LQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTVIWKEKVEMQRQRFRLEFEKHRG 191
Query: 309 ILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDE 352
L Q + +R LE ++ L + + V Q K + + DE
Sbjct: 192 FLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKELADE 235
>gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]
Length = 518
Score = 61.6 bits (148), Expect = 2e-09
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 186 SCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARK-----------CPVHGKTMEL 234
+C C+ SF +P+L+ A +++ IR CP H + ++L
Sbjct: 182 TCPQCRKSFPRRSFRPNLQLA-----NMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKL 236
Query: 235 FCQTDQTCICYLCM-FQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQ 293
FC+ D+ IC +C + HK HS V +EE E + +L E L+ + ++ K +
Sbjct: 237 FCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEE 296
Query: 294 KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDER 353
+ +KS +E A + F L R L +++ + L + + + + L E+
Sbjct: 297 RRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQ 356
Query: 354 AKVL 357
A L
Sbjct: 357 AAQL 360
>gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]
Length = 630
Score = 61.6 bits (148), Expect = 2e-09
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 186 SCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARK-----------CPVHGKTMEL 234
+C C+ SF +P+L+ A +++ IR CP H + ++L
Sbjct: 182 TCPQCRKSFPRRSFRPNLQLA-----NMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKL 236
Query: 235 FCQTDQTCICYLCM-FQEHKNHSTVTVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQ 293
FC+ D+ IC +C + HK HS V +EE E + +L E L+ + ++ K +
Sbjct: 237 FCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEE 296
Query: 294 KEKDRIKSFTTNEKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIMDALDER 353
+ +KS +E A + F L R L +++ + L + + + + L E+
Sbjct: 297 RRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQ 356
Query: 354 AKVL 357
A L
Sbjct: 357 AAQL 360
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,382,072
Number of Sequences: 37866
Number of extensions: 1203041
Number of successful extensions: 6449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 527
Number of HSP's that attempted gapping in prelim test: 4923
Number of HSP's gapped (non-prelim): 1746
length of query: 588
length of database: 18,247,518
effective HSP length: 108
effective length of query: 480
effective length of database: 14,157,990
effective search space: 6795835200
effective search space used: 6795835200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.