TRIM58 987

Name: TRIM58	Sequence: fasta or formatted (486aa)		NCBI GI: 112421127
Description: tripartite motif-containing 58		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 38 2 C cysteine 3.9 19 2 D aspartate 4.9 24 2 E glutamate 9.3 45 2 F phenylalanine 3.7 18 2 G glycine 7.6 37 2 H histidine 1.9 9 1 I isoleucine 2.5 12 1 K lysine 3.5 17 2 L leucine 12.1 59 3 M methionine 1.2 6 1 N asparagine 2.1 10 2 P proline 6.4 31 2 Q glutamine 4.9 24 2 R arginine 9.3 45 2 S serine 5.8 28 2 T threonine 3.7 18 2 V valine 5.6 27 1 W tryptophan 2.1 10 1 Y tyrosine 1.9 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 58 TRIM21 0.366 tripartite motif protein 21 TRIM11 0.363 tripartite motif-containing 11 TRIM68 0.355 ring finger protein 137 TRIM38 0.332 tripartite motif-containing 38 TRIM39 0.318 tripartite motif-containing 39 isoform 2 TRIM39 0.304 tripartite motif-containing 39 isoform 1 TRIM6 0.291 tripartite motif-containing 6 isoform 2 TRIM6 0.291 tripartite motif-containing 6 isoform 1 TRIM17 0.290 tripartite motif-containing 17 isoform 1 TRIM17 0.290 tripartite motif-containing 17 isoform 1 TRIM4 0.281 tripartite motif protein TRIM4 isoform beta TRIM27 0.279 ret finger protein TRIM7 0.273 tripartite motif-containing 7 isoform 1 TRIM4 0.270 tripartite motif protein TRIM4 isoform alpha TRIM17 0.266 tripartite motif-containing 17 isoform 2 TRIM5 0.261 tripartite motif protein TRIM5 isoform alpha TRIM60 0.257 ring finger protein 129 TRIM75 0.256 tripartite motif-containing 75 TRIM34 0.251 tripartite motif protein 34 isoform 1 TRIM34 0.251 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.251 tripartite motif-containing 6 and tripartite motif-c... TRIML1 0.243 tripartite motif family-like 1 TRIM10 0.241 tripartite motif-containing 10 isoform 1 TRIM22 0.240 tripartite motif-containing 22 TRIM43 0.198 tripartite motif-containing 43 TRIM41 0.197 tripartite motif-containing 41 isoform 1 TRIM64 0.197 tripartite motif-containing 64 LOC642446 0.197 PREDICTED: tripartite motif-containing protein 64B-... TRIM5 0.194 tripartite motif protein TRIM5 isoform delta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.