TRIM16 30939

Name: TRIM16	Sequence: fasta or formatted (564aa)		NCBI GI: 48255913
Description: tripartite motif-containing 16		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 41 2 C cysteine 3.0 17 2 D aspartate 5.0 28 2 E glutamate 9.9 56 3 F phenylalanine 3.7 21 1 G glycine 4.8 27 2 H histidine 2.7 15 2 I isoleucine 3.4 19 1 K lysine 6.7 38 3 L leucine 9.2 52 2 M methionine 1.6 9 1 N asparagine 3.2 18 2 P proline 5.7 32 2 Q glutamine 5.5 31 2 R arginine 4.6 26 2 S serine 7.8 44 2 T threonine 4.8 27 2 V valine 6.0 34 2 W tryptophan 1.4 8 1 Y tyrosine 3.7 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 16 TRIM16L 0.594 tripartite motif-containing 16-like LOC100291544 0.306 PREDICTED: hypothetical protein XP_002347761 TRIM47 0.131 tripartite motif-containing 47 TRIM25 0.115 tripartite motif-containing 25 TRIM29 0.106 tripartite motif protein TRIM29 TRIM39 0.086 tripartite motif-containing 39 isoform 1 TRIM39 0.083 tripartite motif-containing 39 isoform 2 TRIM27 0.077 ret finger protein TRIM14 0.067 tripartite motif protein TRIM14 isoform alpha TRIM14 0.067 tripartite motif protein TRIM14 isoform alpha TRIM14 0.067 tripartite motif protein TRIM14 isoform alpha TRIM11 0.065 tripartite motif-containing 11 TRIM41 0.059 tripartite motif-containing 41 isoform 1 TRIM58 0.058 tripartite motif-containing 58 TRIM21 0.057 tripartite motif protein 21 TRIM65 0.055 tripartite motif-containing 65 TRIM7 0.054 tripartite motif-containing 7 isoform 1 MID1 0.054 midline 1 MID1 0.054 midline 1 MID1 0.054 midline 1 MID2 0.052 midline 2 isoform 2 TRIM4 0.046 tripartite motif protein TRIM4 isoform beta BTN1A1 0.045 butyrophilin, subfamily 1, member A1 BTN2A1 0.045 butyrophilin, subfamily 2, member A1 isoform 1 precur... TRIM4 0.044 tripartite motif protein TRIM4 isoform alpha BTN2A2 0.044 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.044 butyrophilin, subfamily 2, member A2 isoform a MEFV 0.044 Mediterranean fever protein TRIM34 0.043 tripartite motif protein 34 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.