TRIM25 34769

Name: TRIM25	Sequence: fasta or formatted (630aa)		NCBI GI: 68160937
Description: tripartite motif-containing 25		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 50 3 C cysteine 4.6 29 1 D aspartate 3.3 21 2 E glutamate 7.8 49 3 F phenylalanine 3.7 23 2 G glycine 3.3 21 1 H histidine 3.7 23 1 I isoleucine 3.5 22 1 K lysine 7.9 50 3 L leucine 9.4 59 2 M methionine 1.3 8 1 N asparagine 3.8 24 2 P proline 6.8 43 3 Q glutamine 5.1 32 2 R arginine 4.6 29 2 S serine 7.6 48 2 T threonine 5.6 35 2 V valine 6.3 40 2 W tryptophan 1.1 7 1 Y tyrosine 2.7 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 25 TRIM47 0.127 tripartite motif-containing 47 TRIM16 0.102 tripartite motif-containing 16 MID1 0.100 midline 1 MID1 0.100 midline 1 MID1 0.100 midline 1 MID2 0.093 midline 2 isoform 2 MID2 0.090 midline 2 isoform 1 TRIM65 0.084 tripartite motif-containing 65 TRIM8 0.079 tripartite motif-containing 8 TRIM39 0.078 tripartite motif-containing 39 isoform 1 TRIM29 0.071 tripartite motif protein TRIM29 TRIM14 0.061 tripartite motif protein TRIM14 isoform alpha TRIM14 0.061 tripartite motif protein TRIM14 isoform alpha TRIM14 0.061 tripartite motif protein TRIM14 isoform alpha RNF135 0.052 ring finger protein 135 isoform 1 TRIM60 0.048 ring finger protein 129 FSD1L 0.045 fibronectin type III and SPRY domain containing 1-li... FSD1L 0.045 fibronectin type III and SPRY domain containing 1-l... TRIM4 0.044 tripartite motif protein TRIM4 isoform alpha TRIM7 0.044 tripartite motif-containing 7 isoform 1 LOC100291544 0.043 PREDICTED: hypothetical protein XP_002347761 TRIML2 0.043 tripartite motif family-like 2 TRIM39 0.042 tripartite motif-containing 39 isoform 2 TRIM7 0.042 tripartite motif-containing 7 isoform 2 TRIM7 0.042 tripartite motif-containing 7 isoform 3 TRIM7 0.042 tripartite motif-containing 7 isoform 3 TRIM7 0.042 tripartite motif-containing 7 isoform 3 BTN2A2 0.042 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.042 butyrophilin, subfamily 2, member A2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.