HMG20A 36945

Name: HMG20A	Sequence: fasta or formatted (347aa)		NCBI GI: 8922633
Description: high-mobility group 20A		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 20 2 C cysteine 0.0 0 0 D aspartate 5.2 18 1 E glutamate 12.1 42 2 F phenylalanine 3.2 11 1 G glycine 3.7 13 2 H histidine 2.6 9 1 I isoleucine 2.3 8 2 K lysine 6.6 23 2 L leucine 8.1 28 2 M methionine 2.6 9 1 N asparagine 5.5 19 2 P proline 5.2 18 2 Q glutamine 5.8 20 2 R arginine 9.2 32 2 S serine 8.6 30 2 T threonine 6.1 21 2 V valine 4.9 17 2 W tryptophan 0.6 2 1 Y tyrosine 2.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 high-mobility group 20A HMG20B 0.404 high-mobility group 20B SSRP1 0.071 structure specific recognition protein 1 HMGB3 0.068 high-mobility group box 3 HMGB1 0.063 high-mobility group box 1 LOC646993 0.063 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.063 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.062 PREDICTED: similar to high mobility group box 3 [Ho... HMGB2 0.060 high-mobility group box 2 HMGB2 0.060 high-mobility group box 2 HMGB2 0.060 high-mobility group box 2 UBTF 0.059 upstream binding transcription factor, RNA polymerase... TOX 0.057 thymus high mobility group box protein TOX TOX2 0.057 TOX high mobility group box family member 2 isoform... TOX2 0.057 TOX high mobility group box family member 2 isoform... TOX2 0.057 TOX high mobility group box family member 2 isoform ... UBTF 0.057 upstream binding transcription factor, RNA polymera... UBTF 0.057 upstream binding transcription factor, RNA polymera... LOC645490 0.056 PREDICTED: similar to hCG1991922 LOC645490 0.056 PREDICTED: similar to hCG1991922 LOC729595 0.056 PREDICTED: similar to high mobility group box 3 iso... SMARCE1 0.056 SWI/SNF-related matrix-associated actin-dependent re... TOX3 0.056 TOX high mobility group box family member 3 isoform... TOX3 0.056 TOX high mobility group box family member 3 isoform... LOC441795 0.056 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.056 PREDICTED: high mobility group protein B3-like prot... LOC645490 0.056 PREDICTED: similar to hCG1991922 HMGB1L1 0.056 high-mobility group box 1-like 1 SP100 0.054 nuclear antigen Sp100 isoform 2 LOC203510 0.053 PREDICTED: similar to hCG1644442 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.