SMARCE1 12762

Name: SMARCE1	Sequence: fasta or formatted (411aa)		NCBI GI: 21264355
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin e1		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 31 2 C cysteine 0.2 1 1 D aspartate 4.9 20 2 E glutamate 14.8 61 3 F phenylalanine 1.2 5 1 G glycine 4.6 19 2 H histidine 1.7 7 1 I isoleucine 3.9 16 2 K lysine 7.3 30 2 L leucine 5.1 21 2 M methionine 3.4 14 1 N asparagine 4.4 18 2 P proline 7.3 30 3 Q glutamine 5.4 22 2 R arginine 5.8 24 1 S serine 8.5 35 2 T threonine 5.4 22 2 V valine 4.1 17 2 W tryptophan 0.7 3 1 Y tyrosine 3.6 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent re... HMG20B 0.051 high-mobility group 20B HMG20A 0.046 high-mobility group 20A TOX3 0.045 TOX high mobility group box family member 3 isoform... TOX3 0.045 TOX high mobility group box family member 3 isoform... TOX4 0.043 epidermal Langerhans cell protein LCP1 TOX 0.043 thymus high mobility group box protein TOX TOX2 0.043 TOX high mobility group box family member 2 isoform... TOX2 0.043 TOX high mobility group box family member 2 isoform... TOX2 0.043 TOX high mobility group box family member 2 isoform ... LOC283685 0.043 PREDICTED: golgi autoantigen, golgin subfamily a-li... UBTF 0.040 upstream binding transcription factor, RNA polymera... UBTF 0.040 upstream binding transcription factor, RNA polymera... LOC283685 0.037 PREDICTED: golgi autoantigen, golgin subfamily a-li... NEFM 0.037 neurofilament, medium polypeptide 150kDa isoform 1 ... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.037 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... LOC100133758 0.037 PREDICTED: hypothetical protein, partial LOC729595 0.037 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.037 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.037 PREDICTED: similar to high mobility group box 3 iso... LOC729595 0.037 PREDICTED: similar to high mobility group box 3 iso... HMGB3 0.037 high-mobility group box 3 NEFM 0.036 neurofilament, medium polypeptide 150kDa isoform 2 ... CALD1 0.036 caldesmon 1 isoform 1 SFRS18 0.036 splicing factor, arginine/serine-rich 130 SFRS18 0.036 splicing factor, arginine/serine-rich 130 LOC645490 0.035 PREDICTED: similar to hCG1991922 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.