LOC441795 8785

Name: LOC441795	Sequence: fasta or formatted (207aa)		NCBI GI: 169212060
Description: PREDICTED: high mobility group protein B3-like protein-like		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt mRNA [207aa] PREDICTED: high mobility group protein B3-like protein-like
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 15 2 C cysteine 2.9 6 1 D aspartate 5.3 11 1 E glutamate 8.7 18 3 F phenylalanine 5.3 11 2 G glycine 5.8 12 2 H histidine 1.9 4 1 I isoleucine 3.4 7 1 K lysine 20.3 42 3 L leucine 3.9 8 1 M methionine 1.9 4 1 N asparagine 3.4 7 1 P proline 6.8 14 2 Q glutamine 2.4 5 1 R arginine 1.4 3 1 S serine 6.3 13 1 T threonine 2.9 6 1 V valine 4.8 10 1 W tryptophan 1.4 3 1 Y tyrosine 3.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: high mobility group protein B3-like prot... LOC441795 1.000 PREDICTED: high mobility group protein B3-like prot... HMGB3 0.793 high-mobility group box 3 LOC646993 0.727 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.727 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.718 PREDICTED: similar to high mobility group box 3 [Ho... LOC203510 0.686 PREDICTED: similar to hCG1644442 LOC203510 0.686 PREDICTED: similar to hCG1644442 LOC203510 0.686 PREDICTED: hypothetical protein LOC203510 LOC729595 0.684 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.684 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.684 PREDICTED: similar to high mobility group box 3 iso... HMGB2 0.603 high-mobility group box 2 HMGB2 0.603 high-mobility group box 2 HMGB2 0.603 high-mobility group box 2 HMGB1 0.591 high-mobility group box 1 HMGB1L1 0.569 high-mobility group box 1-like 1 LOC729595 0.530 PREDICTED: similar to high mobility group box 3 iso... SP100 0.423 nuclear antigen Sp100 isoform 2 LOC645490 0.406 PREDICTED: similar to hCG1991922 LOC645490 0.406 PREDICTED: similar to hCG1991922 LOC645490 0.406 PREDICTED: similar to hCG1991922 HMGB4 0.280 HMG2 like isoform 1 LOC644129 0.251 PREDICTED: similar to hCG1647425 LOC644129 0.251 PREDICTED: similar to hCG1647425 LOC644129 0.217 PREDICTED: similar to hCG1647425 SSRP1 0.127 structure specific recognition protein 1 LOC645101 0.122 PREDICTED: similar to high-mobility group box 2 [Ho... LOC645101 0.122 PREDICTED: similar to high-mobility group box 2 [Ho... LOC645101 0.122 PREDICTED: similar to high-mobility group box 2 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.