Guide to the Human Genome
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Name: FAM134B Sequence: fasta or formatted (497aa) NCBI GI: 77917617
Description:

hypothetical protein LOC54463 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {356aa} hypothetical protein LOC54463 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         43           4
 C cysteine            2.0         10           1
 D aspartate           6.2         31           2
 E glutamate           9.5         47           3
 F phenylalanine       3.8         19           2
 G glycine             6.0         30           2
 H histidine           1.4          7           1
 I isoleucine          4.2         21           2
 K lysine              4.8         24           2
 L leucine            12.7         63           4
 M methionine          1.6          8           1
 N asparagine          2.6         13           1
 P proline             5.8         29           4
 Q glutamine           5.6         28           3
 R arginine            3.6         18           1
 S serine              9.7         48           2
 T threonine           4.4         22           1
 V valine              4.2         21           1
 W tryptophan          1.8          9           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC54463 isoform 1 
FAM134B               0.685   hypothetical protein LOC54463 isoform 2 
FAM134C               0.238   hypothetical protein LOC162427 
FAM134A               0.153   hypothetical protein LOC79137 
SAMD1                 0.018   sterile alpha motif domain containing 1 
RNF19B                0.017   ring finger protein 19B isoform a 
RNF19B                0.017   ring finger protein 19B isoform b 
ARID1A                0.015   AT rich interactive domain 1A isoform a 
ARID1A                0.015   AT rich interactive domain 1A isoform b 
TBKBP1                0.014   TBK1 binding protein 1 
MAP7D1                0.014   MAP7 domain containing 1 
PLEKHH3               0.012   pleckstrin homology domain containing, family H (wit...
CKAP4                 0.012   cytoskeleton-associated protein 4 
ARTN                  0.012   neurotrophic factor artemin isoform 2 
ARTN                  0.012   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.012   neurotrophic factor artemin isoform 3 precursor [Ho...
ARTN                  0.012   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.012   neurotrophic factor artemin isoform 3 precursor [Ho...
GJC2                  0.012   gap junction protein, gamma 2, 47kDa 
SCAF1                 0.012   SR-related CTD-associated factor 1 
SFPQ                  0.012   splicing factor proline/glutamine rich (polypyrimidin...
RBL2                  0.012   retinoblastoma-like 2 (p130) 
SF1                   0.012   splicing factor 1 isoform 2 
SF1                   0.012   splicing factor 1 isoform 1 
NHS                   0.012   Nance-Horan syndrome protein isoform 1 
LRRC24                0.011   leucine rich repeat containing 24 
TAF4                  0.011   TBP-associated factor 4 
RAPH1                 0.011   Ras association and pleckstrin homology domains 1 is...
JSRP1                 0.011   junctional sarcoplasmic reticulum protein 1 
MXRA7                 0.011   transmembrane anchor protein 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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