Guide to the Human Genome
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Name: FBXO5 Sequence: fasta or formatted (447aa) NCBI GI: 6912366
Description:

F-box only protein 5 isoform a

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [401aa] F-box only protein 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         23           2
 C cysteine            5.1         23           1
 D aspartate           4.7         21           2
 E glutamate           6.3         28           2
 F phenylalanine       2.5         11           1
 G glycine             4.7         21           1
 H histidine           2.2         10           1
 I isoleucine          4.0         18           2
 K lysine              9.6         43           2
 L leucine            10.5         47           2
 M methionine          1.3          6           1
 N asparagine          5.1         23           3
 P proline             4.3         19           2
 Q glutamine           4.3         19           2
 R arginine            6.3         28           2
 S serine             11.2         50           2
 T threonine           5.1         23           2
 V valine              4.5         20           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein 5 isoform a 
FBXO5                 0.893   F-box only protein 5 isoform b 
FBXO43                0.141   F-box protein 43 isoform a 
FBXO43                0.141   F-box protein 43 isoform b 
TRIM42                0.009   tripartite motif-containing 42 
CYLC1                 0.009   cylicin, basic protein of sperm head cytoskeleton 1...
RNF19A                0.009   ring finger protein 19 
RNF19A                0.009   ring finger protein 19 
CROCC                 0.008   ciliary rootlet coiled-coil 
ZMPSTE24              0.008   zinc metallopeptidase STE24 
SMG1                  0.008   PI-3-kinase-related kinase SMG-1 
PARK2                 0.007   parkin isoform 3 
PARK2                 0.007   parkin isoform 2 
PARK2                 0.007   parkin isoform 1 
GOLGA4                0.007   golgi autoantigen, golgin subfamily a, 4 
FBXW11                0.007   F-box and WD repeat domain containing 11 isoform B [...
RNF19B                0.007   ring finger protein 19B isoform a 
RNF19B                0.007   ring finger protein 19B isoform b 
BTRC                  0.006   beta-transducin repeat containing protein isoform 2 [...
ADAM17                0.006   a disintegrin and metalloprotease domain 17 prepropr...
BTRC                  0.006   beta-transducin repeat containing protein isoform 1 ...
ASIP                  0.006   agouti signaling protein precursor 
GTF3A                 0.006   transcription factor IIIA 
C1orf71               0.006   hypothetical protein LOC163882 isoform 1 
KIAA0802              0.006   hypothetical protein LOC23255 
ZNF280C               0.006   zinc finger protein 280C 
PLXNA3                0.006   plexin A3 
MMP8                  0.005   matrix metalloproteinase 8 preproprotein 
NR1H4                 0.005   nuclear receptor subfamily 1, group H, member 4 [Homo...
DNTTIP2               0.005   deoxynucleotidyltransferase, terminal, interacting p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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