BTRC 6524

Name: BTRC	Sequence: fasta or formatted (605aa)		NCBI GI: 16117783
Description: beta-transducin repeat containing protein isoform 1		Referenced in: Cullins and SCF Complexes WD Repeat Proteins
Other entries for this name: alt prot [569aa] beta-transducin repeat containing protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 37 2 C cysteine 4.1 25 1 D aspartate 6.1 37 2 E glutamate 5.8 35 2 F phenylalanine 2.5 15 1 G glycine 5.1 31 1 H histidine 2.6 16 2 I isoleucine 5.8 35 2 K lysine 5.3 32 2 L leucine 9.6 58 1 M methionine 2.3 14 2 N asparagine 4.5 27 2 P proline 3.6 22 2 Q glutamine 3.3 20 1 R arginine 7.6 46 2 S serine 8.3 50 3 T threonine 5.6 34 1 V valine 6.3 38 2 W tryptophan 2.3 14 1 Y tyrosine 3.1 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 beta-transducin repeat containing protein isoform 1 ... BTRC 0.923 beta-transducin repeat containing protein isoform 2 [... FBXW11 0.727 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.725 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.725 F-box and WD repeat domain containing 11 isoform B [... FBXW7 0.173 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.173 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.173 F-box and WD repeat domain containing 7 isoform 2 [H... WDR69 0.097 WD repeat domain 69 PAFAH1B1 0.085 platelet-activating factor acetylhydrolase, isoform I... TRAF7 0.083 TNF receptor-associated factor 7 WDR86 0.079 WD repeat domain 86 WDR5 0.079 WD repeat domain 5 WDR5 0.079 WD repeat domain 5 WDR5B 0.078 WD repeat domain 5B TBL3 0.070 transducin beta-like 3 NLE1 0.069 Notchless gene homolog isoform a WDR38 0.069 WD repeat domain 38 KATNB1 0.066 katanin p80 subunit B 1 FBXW2 0.064 F-box and WD repeat domain containing 2 TAF5 0.063 TBP-associated factor 5 PLRG1 0.062 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... TBL1Y 0.060 transducin beta-like 1Y TBL1Y 0.060 transducin beta-like 1Y TBL1Y 0.060 transducin beta-like 1Y TBL1XR1 0.060 transducin (beta)-like 1 X-linked receptor 1 WDR3 0.058 WD repeat-containing protein 3 COPB2 0.058 coatomer protein complex, subunit beta 2 (beta prime)... TBL1X 0.058 transducin beta-like 1X isoform b TBL1X 0.058 transducin beta-like 1X isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.