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Search of human proteins with 66773040
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66773040 phosphatidic acid phosphatase type 2 domain
containing 2 [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66773040 phosphatidic acid phosphatase type 2 domain containi... 593 e-170
gi|223029457 phosphatidic acid phosphatase type 2 domain contain... 250 9e-67
gi|13540569 sphingosine-1-phosphate phosphatase 1 [Homo sapiens] 40 0.002
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 39 0.005
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 39 0.005
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 39 0.005
gi|155723000 mixed lineage kinase 4 [Homo sapiens] 37 0.027
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 36 0.035
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.060
gi|4758168 distal-less homeobox 2 [Homo sapiens] 35 0.079
gi|8659574 transcription factor E3 [Homo sapiens] 35 0.10
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 33 0.30
gi|239752777 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 33 0.30
gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo ... 33 0.30
gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo ... 33 0.30
gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo ... 33 0.30
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 32 0.67
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 32 0.67
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 32 0.67
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 32 0.67
gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens] 32 0.67
gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens] 32 0.67
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 32 0.67
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 32 0.67
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 32 0.87
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 32 0.87
gi|122937189 family with sequence similarity 155, member A [Homo... 32 0.87
gi|4503493 early growth response 1 [Homo sapiens] 32 0.87
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 32 0.87
>gi|66773040 phosphatidic acid phosphatase type 2 domain containing
2 [Homo sapiens]
Length = 295
Score = 593 bits (1530), Expect = e-170
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA
Sbjct: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
Query: 61 SESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLGVC 120
SESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLGVC
Sbjct: 61 SESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLGVC 120
Query: 121 AGESSSWGSVRPLMKLLEISGHGIPWLLGTLYCLCRSDSWAGREVLMNLLFALLLDLLLV 180
AGESSSWGSVRPLMKLLEISGHGIPWLLGTLYCLCRSDSWAGREVLMNLLFALLLDLLLV
Sbjct: 121 AGESSSWGSVRPLMKLLEISGHGIPWLLGTLYCLCRSDSWAGREVLMNLLFALLLDLLLV 180
Query: 181 ALIKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRAALMSRFILNHLVLAIPLRVLVV 240
ALIKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRAALMSRFILNHLVLAIPLRVLVV
Sbjct: 181 ALIKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRAALMSRFILNHLVLAIPLRVLVV 240
Query: 241 LWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPHNAPVLFLLWSQR 295
LWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPHNAPVLFLLWSQR
Sbjct: 241 LWAFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPHNAPVLFLLWSQR 295
>gi|223029457 phosphatidic acid phosphatase type 2 domain containing
3 [Homo sapiens]
Length = 271
Score = 250 bits (639), Expect = 9e-67
Identities = 122/230 (53%), Positives = 165/230 (71%), Gaps = 12/230 (5%)
Query: 75 AAGPSQSPAPP------------LPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLGVCAG 122
A+GPS P P LPEED M LNPSF GIA SLLAID+ +SK+LGVCAG
Sbjct: 42 ASGPSAQPPPAGDGARERRQSQQLPEEDCMQLNPSFKGIAFNSLLAIDICMSKRLGVCAG 101
Query: 123 ESSSWGSVRPLMKLLEISGHGIPWLLGTLYCLCRSDSWAGREVLMNLLFALLLDLLLVAL 182
++SW S R ++KL+ I+GHGIPW+ GT+ CL +S + AG+EVLMNLL ALLLD++ VA
Sbjct: 102 RAASWASARSMVKLIGITGHGIPWIGGTILCLVKSSTLAGQEVLMNLLLALLLDIMTVAG 161
Query: 183 IKGLVRRRRPAHNQMDMFVTLSVDKYSFPSGHATRAALMSRFILNHLVLAIPLRVLVVLW 242
++ L++RR P + L++D Y+FP+GHA+RAA++S+F L+HLVLA+PLRVL+VLW
Sbjct: 162 VQKLIKRRGPYETSPSLLDYLTMDIYAFPAGHASRAAMVSKFFLSHLVLAVPLRVLLVLW 221
Query: 243 AFVLGLSRVMLGRHNVTDVAFGFFLGYMQYSIVDYCWLSPHNAPVLFLLW 292
A +GLSRVM+GRH+VTDV GF +GY+Q+ +V+ W+ +L W
Sbjct: 222 ALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVWMPSSTCQMLISAW 271
>gi|13540569 sphingosine-1-phosphate phosphatase 1 [Homo sapiens]
Length = 441
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 22/137 (16%)
Query: 151 LYCLCRSDSWAGREVLMNLLFAL-----------------LLDLLLVALIKGLVRRRRPA 193
LYCL + G E+ L F +L + L K ++R RPA
Sbjct: 128 LYCLFCFGTELGNELFYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRPA 187
Query: 194 HNQMDMFVTLSVDKYSFPSGHATR--AALMSRFILNHLVLAIPL---RVLVVLWAFVLGL 248
+ +YS PS HA A +S +L + PL +L+ W ++ L
Sbjct: 188 SPPVVKLEVFYNSEYSMPSTHAMSGTAIPISMVLLTYGRWQYPLIYGLILIPCWCSLVCL 247
Query: 249 SRVMLGRHNVTDVAFGF 265
SR+ +G H++ D+ GF
Sbjct: 248 SRIYMGMHSILDIIAGF 264
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 38.9 bits (89), Expect = 0.005
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
+ SPR+ G +G ++S + A GG RF Q+ S AT PT +L
Sbjct: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT---PTLNQLLT 366
Query: 61 SESPVHRR--GSFPLAAAGPSQSPAPP 85
S SP+ R GS+P + PS P PP
Sbjct: 367 SPSPMMRSYGGSYP-EYSSPSAPPPPP 392
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 4 PRRSMEGRPL-GVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASE 62
P M+ RP G +S + SSPG GG G G + + A A A+
Sbjct: 842 PSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAA----AVMQAAAN 897
Query: 63 SPVHRRGSFP-------LAAAGPSQSP 82
S R+GSFP +A++ P P
Sbjct: 898 SAQSRQGSFPGMNQSGLMASSSPYSQP 924
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 38.9 bits (89), Expect = 0.005
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
+ SPR+ G +G ++S + A GG RF Q+ S AT PT +L
Sbjct: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT---PTLNQLLT 366
Query: 61 SESPVHRR--GSFPLAAAGPSQSPAPP 85
S SP+ R GS+P + PS P PP
Sbjct: 367 SPSPMMRSYGGSYP-EYSSPSAPPPPP 392
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 4 PRRSMEGRPL-GVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASE 62
P M+ RP G +S + SSPG GG G G + + A A A+
Sbjct: 829 PSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAA----AVMQAAAN 884
Query: 63 SPVHRRGSFP-------LAAAGPSQSP 82
S R+GSFP +A++ P P
Sbjct: 885 SAQSRQGSFPGMNQSGLMASSSPYSQP 911
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 38.9 bits (89), Expect = 0.005
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
+ SPR+ G +G ++S + A GG RF Q+ S AT PT +L
Sbjct: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT---PTLNQLLT 366
Query: 61 SESPVHRR--GSFPLAAAGPSQSPAPP 85
S SP+ R GS+P + PS P PP
Sbjct: 367 SPSPMMRSYGGSYP-EYSSPSAPPPPP 392
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 4 PRRSMEGRPL-GVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASE 62
P M+ RP G +S + SSPG GG G G + + A A A+
Sbjct: 829 PSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAA----AVMQAAAN 884
Query: 63 SPVHRRGSFP-------LAAAGPSQSP 82
S R+GSFP +A++ P P
Sbjct: 885 SAQSRQGSFPGMNQSGLMASSSPYSQP 911
>gi|155723000 mixed lineage kinase 4 [Homo sapiens]
Length = 1036
Score = 36.6 bits (83), Expect = 0.027
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 3 SPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQ-------SLLSSRATAVDPTC 55
+P S G P G ++SSS+SS GS + G G + ++++ SL + V
Sbjct: 12 TPVSSAGGAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQLVEVLSQD 71
Query: 56 ARLRASE----SPVHRR-GSFP---LAAAGPSQSPAPPLPEEDRMDLNPSFLGIALRSLL 107
A + E V RR G FP +A P+ SPAPP P ++ +F + L+ L+
Sbjct: 72 AAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPP-PSRPSSPVHVAFERLELKELI 130
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 36.2 bits (82), Expect = 0.035
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 12 PLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSF 71
PL S+SSSS S GS GG G + S+L+ + A RASE R G
Sbjct: 45 PLAPSSSSSSGSSGSSGGGGSGSAGQPTLGSMLAVGSAA-------RRASERAGGRAGGT 97
Query: 72 PLAAAGPS----QSPAPPLP 87
L A P P+PP P
Sbjct: 98 ALRAREPPPPLLPPPSPPQP 117
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 35.4 bits (80), Expect = 0.060
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 14 GVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPL 73
GVS+ +S+SS S + GG + SL SS P + E P + S P
Sbjct: 320 GVSSFTSASSSSSSSSSSSGGPFQPAVSSLQSS------PDFSAFPKLEQPEEDKYSKPT 373
Query: 74 AAAGPSQSPAPPLPEEDRMDL 94
A A PS P+P PE + DL
Sbjct: 374 APA-PSAPPSPSAPEPPKADL 393
>gi|4758168 distal-less homeobox 2 [Homo sapiens]
Length = 328
Score = 35.0 bits (79), Expect = 0.079
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 3 SPRRSMEGRPLGVSASSSSS---SPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLR 59
S + E L VS ++ SS + PA GGGGGGS + +A+ ++ +
Sbjct: 46 SLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAK 105
Query: 60 ASESPVHRRGSFPLAAAGPSQSPAPPLPEEDRMDLNP 96
+S + A G S SPA PE++ DL P
Sbjct: 106 SSYDLGYTAAYTSYAPYGTSSSPANNEPEKE--DLEP 140
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 34.7 bits (78), Expect = 0.10
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 2 PSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRAS 61
P P RS L +S ++ ++P + + GGSR S SS + R +A
Sbjct: 71 PLPLRSS----LPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQ 126
Query: 62 ESPVHRRGSFPLAAAGPSQSPAPPLP 87
E RR AAA P SPAP P
Sbjct: 127 EQ--ERRERREQAAAAPFPSPAPASP 150
>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.30
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 23/100 (23%)
Query: 2 PSPRRSMEGRPLGVSASSSSS-----------------SPGSPAHGGGGGGSRFEFQSLL 44
PS SMEG SS S+ +P A G GGG + ++ +
Sbjct: 42 PSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEV 101
Query: 45 SSRATAVDPTCARLRASESPVH-----RRGSFPLAAAGPS 79
S +A+ PTC+ R S S R G F L AGPS
Sbjct: 102 SPKASPPRPTCSVCRKSPSGAEMDRAPRSGRF-LGCAGPS 140
>gi|239752777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.30
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
A S + PG+PAHG + + ++SRA P + A + P+ R+G P A
Sbjct: 34 AHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRP--GEIDARQGPL-RQGLGPSCGA 90
Query: 77 GPSQSPAPP 85
P +P P
Sbjct: 91 HPGSAPGVP 99
>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.30
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 23/100 (23%)
Query: 2 PSPRRSMEGRPLGVSASSSSS-----------------SPGSPAHGGGGGGSRFEFQSLL 44
PS SMEG SS S+ +P A G GGG + ++ +
Sbjct: 42 PSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEV 101
Query: 45 SSRATAVDPTCARLRASESPVH-----RRGSFPLAAAGPS 79
S +A+ PTC+ R S S R G F L AGPS
Sbjct: 102 SPKASPPRPTCSVCRKSPSGAEMDRAPRSGRF-LGCAGPS 140
>gi|239747289 PREDICTED: hypothetical protein XP_002346412 [Homo
sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.30
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
A S + PG+PAHG + + ++SRA P + A + P+ R+G P A
Sbjct: 34 AHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRP--GEIDARQGPL-RQGLGPSCGA 90
Query: 77 GPSQSPAPP 85
P +P P
Sbjct: 91 HPGSAPGVP 99
>gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo
sapiens]
Length = 179
Score = 33.1 bits (74), Expect = 0.30
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 23/100 (23%)
Query: 2 PSPRRSMEGRPLGVSASSSSS-----------------SPGSPAHGGGGGGSRFEFQSLL 44
PS SMEG SS S+ +P A G GGG + ++ +
Sbjct: 42 PSTASSMEGPRSRWKDSSGSAGEGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEV 101
Query: 45 SSRATAVDPTCARLRASESPVH-----RRGSFPLAAAGPS 79
S +A+ PTC+ R S S R G F L AGPS
Sbjct: 102 SPKASPPRPTCSVCRKSPSGAEMDRAPRSGRF-LGCAGPS 140
>gi|239741113 PREDICTED: hypothetical protein XP_002342112 [Homo
sapiens]
Length = 108
Score = 33.1 bits (74), Expect = 0.30
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
A S + PG+PAHG + + ++SRA P + A + P+ R+G P A
Sbjct: 34 AHSRGAGPGAPAHGEVDVDGHVQQRQAVASRAATKRP--GEIDARQGPL-RQGLGPSCGA 90
Query: 77 GPSQSPAPP 85
P +P P
Sbjct: 91 HPGSAPGVP 99
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 32.0 bits (71), Expect = 0.67
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 16/97 (16%)
Query: 6 RSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPV 65
+ +EG LG S S+++ S G+ E S LS + A ++ +
Sbjct: 318 KGLEGESLGCSGSAAAGSSGT-----------LELPSTLSLYKSGALDEAAAYQSRDYY- 365
Query: 66 HRRGSFPLAAAGPSQSPAPPLPEEDRMDLNPSFLGIA 102
+FPLA AGP P PP P NP G A
Sbjct: 366 ----NFPLALAGPPPPPPPPHPHARIKLENPLDYGSA 398
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 32.0 bits (71), Expect = 0.67
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 10 GRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRG 69
G P S+SSSSSSP P GG + LSS + A + + R
Sbjct: 46 GPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRP 105
Query: 70 SFPLA--AAGPSQSPA 83
S P+A AA PS SP+
Sbjct: 106 SMPVASGAALPSASPS 121
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 32.0 bits (71), Expect = 0.67
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 1 MPSPRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRA 60
+PSP S P S+S +S P HG S E S+ SS ++ P A +
Sbjct: 554 LPSPTDSPSSLPPLPSSSGQASVPSELGHGADTQSS--ESPSVFSSLSS---PIAAPIST 608
Query: 61 SESPVHRRGSFPLAAAGPSQSPAPPL 86
S +P+ S+PL G ++S PPL
Sbjct: 609 S-TPIE---SWPLVDRGQAKSEGPPL 630
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 32.0 bits (71), Expect = 0.67
Identities = 42/152 (27%), Positives = 56/152 (36%), Gaps = 17/152 (11%)
Query: 4 PRRSMEGRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASES 63
P S+E PL SS PA +SL T V P C RL S +
Sbjct: 1580 PSSSLEAEPLSKEESSLGEESFLPALSMPRAS-----RSLSKPEPTYVSPPCPRLSHS-T 1633
Query: 64 PVHRRGSFPLAAA-----GPSQSPAPPLPEEDRMDLNPSFLGIALRSLLAIDLWLSKKLG 118
P RG + A GPS +P+P + +P G ++ + +G
Sbjct: 1634 PGKSRGQTYICQACTPTHGPSSTPSPFQTDGVPWTPSPKHSGKTTPDIIKDWPRRKRAVG 1693
Query: 119 VCAGESSSWGSVRP----LMKLLEISG--HGI 144
AG SS G V + LLE G HG+
Sbjct: 1694 CGAGSSSGRGEVGADLPGSLSLLESEGKDHGL 1725
>gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 32.0 bits (71), Expect = 0.67
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 209 SFPSGHATRAA---------LMSRFILNHLVLAIPL-RVLVVLWAFVLGLSRVMLGRHNV 258
SF SGHA+ + L +RF L PL + +++ AF GLSRV +H+
Sbjct: 194 SFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHP 253
Query: 259 TDVAFGFFLG 268
+DV GF G
Sbjct: 254 SDVLAGFAQG 263
>gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]
Length = 311
Score = 32.0 bits (71), Expect = 0.67
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 209 SFPSGHATRAA---------LMSRFILNHLVLAIPL-RVLVVLWAFVLGLSRVMLGRHNV 258
SF SGHA+ + L +RF L PL + +++ AF GLSRV +H+
Sbjct: 194 SFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHP 253
Query: 259 TDVAFGFFLG 268
+DV GF G
Sbjct: 254 SDVLAGFAQG 263
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 32.0 bits (71), Expect = 0.67
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 21/88 (23%)
Query: 4 PRRSMEGRPLGVSASSSSSSPGSPAHGGGGGG---------------------SRFEFQS 42
PR S G G S+SS SS G +G GGGG SR + +
Sbjct: 164 PRGSQGGGGGGSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSED 223
Query: 43 LLSSRATAVDPTCARLRASESPVHRRGS 70
+SS VD T + R++ + ++ +GS
Sbjct: 224 SISSTIMDVDSTISSGRSTPAMMNGQGS 251
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 32.0 bits (71), Expect = 0.67
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 21/88 (23%)
Query: 4 PRRSMEGRPLGVSASSSSSSPGSPAHGGGGGG---------------------SRFEFQS 42
PR S G G S+SS SS G +G GGGG SR + +
Sbjct: 164 PRGSQGGGGGGSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSED 223
Query: 43 LLSSRATAVDPTCARLRASESPVHRRGS 70
+SS VD T + R++ + ++ +GS
Sbjct: 224 SISSTIMDVDSTISSGRSTPAMMNGQGS 251
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
++S S P +P HG S + ATA C +L+ SF L+
Sbjct: 357 SASPSPEPWTPGHGACSTSSA-------AIMATATSRNCDKLK----------SFHLSPR 399
Query: 77 GPSQSPAPPLPEEDRMDLNPSFLGIA 102
GP S PP+P P FL IA
Sbjct: 400 GPPTSEPPPVPAN-----KPKFLKIA 420
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
++S S P +P HG S + ATA C +L+ SF L+
Sbjct: 328 SASPSPEPWTPGHGACSTSSA-------AIMATATSRNCDKLK----------SFHLSPR 370
Query: 77 GPSQSPAPPLPEEDRMDLNPSFLGIA 102
GP S PP+P P FL IA
Sbjct: 371 GPPTSEPPPVPAN-----KPKFLKIA 391
>gi|122937189 family with sequence similarity 155, member A [Homo
sapiens]
Length = 458
Score = 31.6 bits (70), Expect = 0.87
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 15 VSASSSSSSPGSPAHGGGGGG 35
+SASSS + P SP GGGGGG
Sbjct: 123 LSASSSPTLPPSPGDGGGGGG 143
>gi|4503493 early growth response 1 [Homo sapiens]
Length = 543
Score = 31.6 bits (70), Expect = 0.87
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 10 GRPLGVSASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESP--VHR 67
G P G ++SSSSS G GGGGG + S + +A + L A P
Sbjct: 53 GAPEGSGSNSSSSSSGGGG-GGGGGSNSSSSSSTFNPQADTGEQPYEHLTAESFPDISLN 111
Query: 68 RGSFPLAAAGPSQSP-APPLPEEDRMDLNPS 97
+ + PSQ+ PP+ R L P+
Sbjct: 112 NEKVLVETSYPSQTTRLPPITYTGRFSLEPA 142
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 31.6 bits (70), Expect = 0.87
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 17 ASSSSSSPGSPAHGGGGGGSRFEFQSLLSSRATAVDPTCARLRASESPVHRRGSFPLAAA 76
++S S P +P HG S + ATA C +L+ SF L+
Sbjct: 300 SASPSPEPWTPGHGACSTSSA-------AIMATATSRNCDKLK----------SFHLSPR 342
Query: 77 GPSQSPAPPLPEEDRMDLNPSFLGIA 102
GP S PP+P P FL IA
Sbjct: 343 GPPTSEPPPVPAN-----KPKFLKIA 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,901,971
Number of Sequences: 37866
Number of extensions: 554812
Number of successful extensions: 6625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 6173
Number of HSP's gapped (non-prelim): 465
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.