Guide to the Human Genome
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Name: FAM155A Sequence: fasta or formatted (458aa) NCBI GI: 122937189
Description:

family with sequence similarity 155, member A

Referenced in:

Gene Structure

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         30           2
 C cysteine            4.8         22           2
 D aspartate           4.1         19           2
 E glutamate           7.4         34           2
 F phenylalanine       3.5         16           2
 G glycine             6.8         31           6
 H histidine           2.0          9           2
 I isoleucine          2.0          9           1
 K lysine              4.8         22           1
 L leucine            10.0         46           2
 M methionine          0.9          4           1
 N asparagine          4.1         19           2
 P proline             4.4         20           2
 Q glutamine           8.1         37           9
 R arginine            5.9         27           2
 S serine              9.4         43           3
 T threonine           5.7         26           2
 V valine              4.4         20           2
 W tryptophan          2.2         10           1
 Y tyrosine            3.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 155, member A [Homo... 
FAM155B               0.246   transmembrane protein 28 
TBP                   0.038   TATA box binding protein 
POU3F2                0.037   POU domain, class 3, transcription factor 2 
SMARCA2               0.035   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.035   SWI/SNF-related matrix-associated actin-dependent re...
THAP11                0.035   THAP domain containing 11 
MAML2                 0.033   mastermind-like 2 
FOXP2                 0.033   forkhead box P2 isoform I 
FOXP2                 0.033   forkhead box P2 isoform III 
FOXP2                 0.033   forkhead box P2 isoform II 
ATXN1                 0.032   ataxin 1 
ATXN1                 0.032   ataxin 1 
HTT                   0.032   huntingtin 
MN1                   0.032   meningioma  1 
ATXN2                 0.031   ataxin 2 
EP400                 0.031   E1A binding protein p400 
MED12                 0.030   mediator complex subunit 12 
BMP2K                 0.029   BMP-2 inducible kinase isoform a 
BMP2K                 0.029   BMP-2 inducible kinase isoform b 
C14orf4               0.029   chromosome 14 open reading frame 4 
NCOA3                 0.028   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.028   nuclear receptor coactivator 3 isoform b 
FRMPD3                0.028   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.028   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.028   PREDICTED: FERM and PDZ domain containing 3 
MAML3                 0.026   mastermind-like 3 
RUNX2                 0.025   runt-related transcription factor 2 isoform b [Homo...
RUNX2                 0.025   runt-related transcription factor 2 isoform a [Homo...
RUNX2                 0.025   runt-related transcription factor 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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