Guide to the Human Genome
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Name: PPAPDC2 Sequence: fasta or formatted (295aa) NCBI GI: 66773040
Description:

phosphatidic acid phosphatase type 2 domain containing 2

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         24           3
 C cysteine            1.7          5           1
 D aspartate           3.4         10           1
 E glutamate           2.7          8           2
 F phenylalanine       4.4         13           2
 G glycine             8.5         25           6
 H histidine           2.7          8           1
 I isoleucine          2.7          8           1
 K lysine              1.7          5           2
 L leucine            16.3         48           3
 M methionine          3.4         10           1
 N asparagine          2.0          6           1
 P proline             7.1         21           2
 Q glutamine           1.7          5           1
 R arginine            8.1         24           4
 S serine             12.5         37           6
 T threonine           2.0          6           1
 V valine              6.8         20           2
 W tryptophan          2.4          7           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidic acid phosphatase type 2 domain containi... 
PPAPDC3               0.396   phosphatidic acid phosphatase type 2 domain contain...
SGPP1                 0.026   sphingosine-1-phosphate phosphatase 1 
ARID1B                0.025   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.025   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.025   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KIAA1804              0.021   mixed lineage kinase 4 
LOC100293268          0.019   PREDICTED: hypothetical protein 
MLLT6                 0.018   myeloid/lymphoid or mixed-lineage leukemia (trithora...
DLX2                  0.018   distal-less homeobox 2 
TFE3                  0.018   transcription factor E3 
LOC100291627          0.014   PREDICTED: hypothetical protein XP_002345251 
LOC100293085          0.014   PREDICTED: hypothetical protein 
LOC100289867          0.014   PREDICTED: hypothetical protein XP_002348034 
LOC100290159          0.014   PREDICTED: hypothetical protein XP_002346412 
LOC100288231          0.014   PREDICTED: hypothetical protein XP_002343737 
LOC100286999          0.014   PREDICTED: hypothetical protein XP_002342112 
AR                    0.012   androgen receptor isoform 1 
NKX6-1                0.012   NK6 transcription factor related, locus 1 
RAB11FIP1             0.012   RAB11 family interacting protein 1 isoform 3 
C15orf42              0.012   leucine-rich repeat kinase 1 
PPAP2B                0.012   phosphatidic acid phosphatase type 2B 
PPAP2B                0.012   phosphatidic acid phosphatase type 2B 
AEBP2                 0.012   AE binding protein 2 isoform b 
AEBP2                 0.012   AE binding protein 2 isoform a 
SH3BP2                0.012   SH3-domain binding protein 2 isoform b 
SH3BP2                0.012   SH3-domain binding protein 2 isoform c 
FAM155A               0.012   family with sequence similarity 155, member A [Homo...
EGR1                  0.012   early growth response 1 
SH3BP2                0.012   SH3-domain binding protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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