Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AEBP2 Sequence: fasta or formatted (503aa) NCBI GI: 166795262
Description:

AE binding protein 2 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [517aa] AE binding protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         34           3
 C cysteine            1.8          9           2
 D aspartate           5.8         29           2
 E glutamate           9.9         50          12
 F phenylalanine       1.8          9           2
 G glycine            13.1         66          10
 H histidine           2.8         14           1
 I isoleucine          2.8         14           1
 K lysine              5.2         26           1
 L leucine             6.6         33           3
 M methionine          2.4         12           2
 N asparagine          2.6         13           1
 P proline             5.2         26           2
 Q glutamine           3.0         15           2
 R arginine            5.2         26           3
 S serine             15.5         78           5
 T threonine           3.8         19           2
 V valine              4.2         21           2
 W tryptophan          1.0          5           1
 Y tyrosine            0.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AE binding protein 2 isoform a 
AEBP2                 1.000   AE binding protein 2 isoform b 
GLI1                  0.057   GLI family zinc finger 1 isoform 1 
GLI1                  0.056   GLI family zinc finger 1 isoform 2 
GLIS3                 0.052   GLIS family zinc finger 3 isoform a 
GLIS3                 0.052   GLIS family zinc finger 3 isoform b 
GLIS1                 0.049   GLIS family zinc finger 1 
BHLHE22               0.048   basic helix-loop-helix domain containing, class B, 5...
KRT10                 0.048   keratin 10 
RREB1                 0.047   ras responsive element binding protein 1 isoform 2 [...
RREB1                 0.047   ras responsive element binding protein 1 isoform 1 [...
GLI2                  0.046   GLI-Kruppel family member GLI2 
GLI3                  0.046   GLI-Kruppel family member GLI3 
RPGR                  0.045   retinitis pigmentosa GTPase regulator isoform C [Hom...
TNRC18                0.045   trinucleotide repeat containing 18 
DSPP                  0.040   dentin sialophosphoprotein preproprotein 
KRT9                  0.040   keratin 9 
LOR                   0.040   loricrin 
SP8                   0.039   Sp8 transcription factor isoform 1 
SP8                   0.039   Sp8 transcription factor isoform 2 
GLIS2                 0.039   GLIS family zinc finger 2 
ZBTB37                0.037   zinc finger and BTB domain containing 37 isoform a ...
FUS                   0.037   fusion (involved in t(12;16) in malignant liposarcoma...
CLIC6                 0.036   chloride intracellular channel 6 
ARID3A                0.035   AT rich interactive domain 3A (BRIGHT- like) protein ...
ZIC5                  0.035   zinc finger protein of the cerebellum 5 
ZIC2                  0.034   zinc finger protein of the cerebellum 2 
DMKN                  0.034   dermokine isoform 5 precursor 
ZIC4                  0.034   zinc finger protein of the cerebellum 4 
IBSP                  0.034   integrin-binding sialoprotein precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press