Guide to the Human Genome
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Name: DLX2 Sequence: fasta or formatted (328aa) NCBI GI: 4758168
Description:

distal-less homeobox 2

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         34           2
 C cysteine            0.3          1           1
 D aspartate           1.8          6           1
 E glutamate           3.0         10           1
 F phenylalanine       2.4          8           1
 G glycine            12.2         40           7
 H histidine           5.2         17           7
 I isoleucine          2.1          7           1
 K lysine              4.0         13           2
 L leucine             5.2         17           2
 M methionine          1.5          5           1
 N asparagine          2.7          9           2
 P proline             9.8         32           2
 Q glutamine           6.7         22           2
 R arginine            2.7          9           2
 S serine             14.9         49           6
 T threonine           5.8         19           1
 V valine              3.0         10           1
 W tryptophan          1.2          4           1
 Y tyrosine            4.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 2 
DLX5                  0.307   distal-less homeobox 5 
DLX3                  0.291   distal-less homeobox 3 
DLX6                  0.178   distal-less homeobox 6 
DLX1                  0.164   distal-less homeobox 1 isoform 1 
DLX4                  0.148   distal-less homeobox 4 isoform a 
DLX4                  0.148   distal-less homeobox 4 isoform b 
NKX1-1                0.108   PREDICTED: HPX-153 homeobox 
NKX1-1                0.108   PREDICTED: NK1 homeobox 1 
MSX1                  0.107   msh homeobox 1 
NKX1-2                0.102   NK1 homeobox 2 
NKX1-2                0.102   PREDICTED: NK1 homeobox 2 
NKX1-2                0.102   PREDICTED: NK1 homeobox 2 
NKX1-2                0.102   PREDICTED: NK1 homeobox 2 
NKX1-1                0.096   PREDICTED: NK1 homeobox 1 
NKX2-3                0.093   NK2 transcription factor related, locus 3 
NKX2-6                0.090   NK2 transcription factor related, locus 6 
BARX2                 0.090   BarH-like homeobox 2 
MNX1                  0.085   homeo box HB9 
NKX2-4                0.085   NK2 homeobox 4 
HOXA3                 0.084   homeobox A3 isoform a 
HOXA3                 0.084   homeobox A3 isoform a 
HOXA1                 0.084   homeobox A1 isoform a 
MSX2                  0.084   msh homeobox 2 
HOXB1                 0.082   homeobox B1 
NKX2-8                0.082   NK2 homeobox 8 
BSX                   0.082   brain specific homeobox 
BARHL1                0.081   BarH-like homeobox 1 
HOXD3                 0.079   homeobox D3 
BARX1                 0.079   BarH-like homeobox 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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