Guide to the Human Genome
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Name: PLA2R1 Sequence: fasta or formatted (1324aa) NCBI GI: 55953106
Description:

phospholipase A2 receptor 1 isoform 2 precursor

Referenced in:

Fibronectin Family
Lectin Families
Lipid Metabolism

Other entries for this name:
alt prot [1463aa] phospholipase A2 receptor 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         67           3
 C cysteine            3.9         52           1
 D aspartate           4.3         57           2
 E glutamate           8.1        107           3
 F phenylalanine       5.1         68           1
 G glycine             6.0         79           3
 H histidine           4.1         54           2
 I isoleucine          4.5         59           2
 K lysine              5.8         77           3
 L leucine             8.2        109           7
 M methionine          1.7         22           1
 N asparagine          5.3         70           2
 P proline             4.2         55           2
 Q glutamine           3.8         50           1
 R arginine            3.4         45           1
 S serine              8.7        115           2
 T threonine           5.5         73           2
 V valine              4.5         60           2
 W tryptophan          4.5         59           2
 Y tyrosine            3.5         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2 receptor 1 isoform 2 precursor [Hom... 
PLA2R1                0.999   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
MRC2                  0.294   mannose receptor, C type 2 
LY75                  0.271   lymphocyte antigen 75 
MRC1L1                0.205   mannose receptor, C type 1-like 1 
MRC1                  0.204   mannose receptor C type 1 precursor 
MMP2                  0.018   matrix metalloproteinase 2 isoform b 
MMP2                  0.018   matrix metalloproteinase 2 isoform a preproprotein [...
ACAN                  0.018   aggrecan isoform 2 precursor 
ACAN                  0.018   aggrecan isoform 1 precursor 
FN1                   0.018   fibronectin 1 isoform 3 preproprotein 
FN1                   0.018   fibronectin 1 isoform 1 preproprotein 
FN1                   0.018   fibronectin 1 isoform 4 preproprotein 
FN1                   0.018   fibronectin 1 isoform 5 preproprotein 
FN1                   0.018   fibronectin 1 isoform 2 preproprotein 
FN1                   0.018   fibronectin 1 isoform 6 preproprotein 
FN1                   0.018   fibronectin 1 isoform 7 preproprotein 
SEL1L                 0.018   sel-1 suppressor of lin-12-like 
NCAN                  0.017   chondroitin sulfate proteoglycan 3 
F12                   0.017   coagulation factor XII precursor 
MMP9                  0.016   matrix metalloproteinase 9 preproprotein 
VCAN                  0.016   versican isoform 2 
VCAN                  0.016   versican isoform 1 
REG1B                 0.016   regenerating islet-derived 1 beta precursor 
CLEC4C                0.016   C-type lectin domain family 4, member C isoform 2 [H...
CLEC4C                0.016   C-type lectin domain family 4, member C isoform 1 [H...
FCER2                 0.015   Fc fragment of IgE, low affinity II, receptor for (C...
BCAN                  0.015   brevican isoform 1 
REG1A                 0.014   regenerating islet-derived 1 alpha precursor 
CD209                 0.014   CD209 molecule isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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