BCAN 26966

Name: BCAN	Sequence: fasta or formatted (911aa)		NCBI GI: 38372935
Description: brevican isoform 1		Referenced in: Protein Glycosylation Extracellular Matrix
Other entries for this name: alt prot [671aa] brevican isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 85 2 C cysteine 2.9 26 1 D aspartate 4.8 44 2 E glutamate 10.5 96 8 F phenylalanine 2.5 23 1 G glycine 9.2 84 4 H histidine 1.4 13 1 I isoleucine 2.3 21 1 K lysine 1.4 13 1 L leucine 9.0 82 2 M methionine 0.9 8 1 N asparagine 2.4 22 2 P proline 9.5 87 3 Q glutamine 3.7 34 1 R arginine 6.9 63 2 S serine 7.5 68 2 T threonine 4.3 39 2 V valine 6.1 56 2 W tryptophan 1.6 15 1 Y tyrosine 3.5 32 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 brevican isoform 1 BCAN 0.688 brevican isoform 2 ACAN 0.185 aggrecan isoform 2 precursor ACAN 0.185 aggrecan isoform 1 precursor NCAN 0.165 chondroitin sulfate proteoglycan 3 VCAN 0.161 versican isoform 1 VCAN 0.160 versican isoform 2 HAPLN3 0.112 hyaluronan and proteoglycan link protein 3 HAPLN1 0.107 hyaluronan and proteoglycan link protein 1 HAPLN4 0.099 hyaluronan and proteoglycan link protein 4 HAPLN2 0.096 brain link protein-1 MRC2 0.044 mannose receptor, C type 2 MRC1L1 0.038 mannose receptor, C type 1-like 1 CLEC4D 0.037 C-type lectin domain family 4, member D MRC1 0.037 mannose receptor C type 1 precursor COLEC12 0.035 collectin sub-family member 12 FCER2 0.034 Fc fragment of IgE, low affinity II, receptor for (C... CD209 0.034 CD209 molecule isoform 8 CD209 0.034 CD209 molecule isoform 3 CD209 0.034 CD209 molecule isoform 7 CD209 0.034 CD209 molecule isoform 6 CD209 0.034 CD209 molecule isoform 5 CD209 0.034 CD209 molecule isoform 1 CLEC10A 0.033 C-type lectin, superfamily member 14 isoform 1 [Homo... CLEC10A 0.033 C-type lectin, superfamily member 14 isoform 2 [Homo... CD209 0.032 CD209 molecule isoform 4 CLEC4M 0.029 C-type lectin domain family 4, member M isoform 9 [... CLEC4M 0.029 C-type lectin domain family 4, member M isoform 7 [... CLEC4M 0.029 C-type lectin domain family 4, member M isoform 12 ... CLEC4M 0.029 C-type lectin domain family 4, member M isoform 2 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.