ACAN 2837

Name: ACAN	Sequence: fasta or formatted (2416aa)		NCBI GI: 126090892
Description: aggrecan isoform 2 precursor		Referenced in: Bone and Related Tissues Protein Glycosylation Extracellular Matrix
Other entries for this name: alt prot [2317aa] aggrecan isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 166 3 C cysteine 1.4 34 1 D aspartate 4.5 108 1 E glutamate 11.0 266 3 F phenylalanine 2.8 68 2 G glycine 12.0 291 2 H histidine 1.4 33 2 I isoleucine 3.4 82 2 K lysine 1.2 28 2 L leucine 7.6 183 2 M methionine 0.5 13 1 N asparagine 1.2 30 3 P proline 9.1 219 2 Q glutamine 2.6 63 2 R arginine 3.3 79 2 S serine 12.3 297 3 T threonine 8.2 198 3 V valine 7.6 184 3 W tryptophan 1.0 25 1 Y tyrosine 2.0 49 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 aggrecan isoform 2 precursor ACAN 0.940 aggrecan isoform 1 precursor BCAN 0.071 brevican isoform 2 BCAN 0.071 brevican isoform 1 VCAN 0.070 versican isoform 1 VCAN 0.070 versican isoform 2 NCAN 0.063 chondroitin sulfate proteoglycan 3 HAPLN3 0.041 hyaluronan and proteoglycan link protein 3 HAPLN1 0.039 hyaluronan and proteoglycan link protein 1 HAPLN2 0.034 brain link protein-1 HAPLN4 0.034 hyaluronan and proteoglycan link protein 4 COL3A1 0.026 collagen type III alpha 1 preproprotein COL4A1 0.024 alpha 1 type IV collagen preproprotein COL4A6 0.024 type IV alpha 6 collagen isoform A precursor COL4A6 0.024 type IV alpha 6 collagen isoform B precursor COL5A2 0.022 alpha 2 type V collagen preproprotein MUC4 0.021 mucin 4 isoform a COL4A5 0.021 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.021 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.021 type IV collagen alpha 5 isoform 3 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 1 precursor COL5A3 0.020 collagen, type V, alpha 3 preproprotein MUC12 0.019 PREDICTED: mucin 12 MUC12 0.019 PREDICTED: mucin 12 COL4A2 0.019 alpha 2 type IV collagen preproprotein MRC2 0.019 mannose receptor, C type 2 COL24A1 0.019 collagen, type XXIV, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.