Guide to the Human Genome
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Name: REG1B Sequence: fasta or formatted (166aa) NCBI GI: 10835248
Description:

regenerating islet-derived 1 beta precursor

Referenced in:

Pancreas and Insulin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          9           1
 C cysteine            4.2          7           1
 D aspartate           4.8          8           2
 E glutamate           5.4          9           1
 F phenylalanine       5.4          9           2
 G glycine             5.4          9           1
 H histidine           1.2          2           1
 I isoleucine          2.4          4           1
 K lysine              6.6         11           2
 L leucine             7.2         12           1
 M methionine          2.4          4           1
 N asparagine          6.6         11           1
 P proline             3.6          6           1
 Q glutamine           3.6          6           1
 R arginine            2.4          4           2
 S serine             16.3         27           2
 T threonine           4.8          8           1
 V valine              4.2          7           1
 W tryptophan          3.6          6           1
 Y tyrosine            4.2          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regenerating islet-derived 1 beta precursor 
REG1A                 0.859   regenerating islet-derived 1 alpha precursor 
REG3G                 0.446   regenerating islet-derived 3 gamma 
REG3G                 0.446   regenerating islet-derived 3 gamma 
REG3A                 0.431   pancreatitis-associated protein precursor 
REG3A                 0.431   pancreatitis-associated protein precursor 
REG3A                 0.431   pancreatitis-associated protein precursor 
REG4                  0.214   regenerating islet-derived family, member 4 isoform...
REG4                  0.214   regenerating islet-derived family, member 4 isoform ...
COLEC12               0.156   collectin sub-family member 12 
MRC1                  0.150   mannose receptor C type 1 precursor 
MRC1L1                0.150   mannose receptor, C type 1-like 1 
MRC2                  0.144   mannose receptor, C type 2 
FCER2                 0.135   Fc fragment of IgE, low affinity II, receptor for (C...
PLA2R1                0.135   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
PLA2R1                0.135   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
ACAN                  0.128   aggrecan isoform 1 precursor 
ACAN                  0.128   aggrecan isoform 2 precursor 
CLEC10A               0.128   C-type lectin, superfamily member 14 isoform 2 [Homo...
ASGR1                 0.125   asialoglycoprotein receptor 1 
LY75                  0.122   lymphocyte antigen 75 
CLEC10A               0.122   C-type lectin, superfamily member 14 isoform 1 [Homo...
CD207                 0.116   CD207 antigen, langerin 
NCAN                  0.113   chondroitin sulfate proteoglycan 3 
ASGR2                 0.110   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.110   asialoglycoprotein receptor 2 isoform b 
ASGR2                 0.110   asialoglycoprotein receptor 2 isoform a 
ASGR2                 0.110   asialoglycoprotein receptor 2 isoform a 
CLEC4M                0.107   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.107   C-type lectin domain family 4, member M isoform 7 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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