Guide to the Human Genome
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Name: LY9 Sequence: fasta or formatted (655aa) NCBI GI: 55925578
Description:

lymphocyte antigen 9 isoform a

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [193aa] lymphocyte antigen 9 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         34           2
 C cysteine            2.9         19           1
 D aspartate           4.1         27           2
 E glutamate           7.0         46           3
 F phenylalanine       2.6         17           1
 G glycine             5.5         36           2
 H histidine           1.8         12           1
 I isoleucine          4.6         30           2
 K lysine              4.4         29           1
 L leucine             7.9         52           2
 M methionine          1.4          9           1
 N asparagine          4.0         26           1
 P proline             7.5         49           3
 Q glutamine           4.6         30           2
 R arginine            4.3         28           2
 S serine             11.5         75           3
 T threonine           7.9         52           2
 V valine              8.1         53           2
 W tryptophan          1.8         12           1
 Y tyrosine            2.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 9 isoform a 
LY9                   0.211   lymphocyte antigen 9 isoform b 
CD84                  0.088   CD84 molecule 
SLAMF9                0.081   SLAM family member 9 isoform 1 
SLAMF7                0.070   SLAM family member 7 
SLAMF6                0.060   activating NK receptor precursor 
SLAMF9                0.035   SLAM family member 9 isoform 2 
CEACAM1               0.032   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.029   carcinoembryonic antigen-related cell adhesion molec...
CD244                 0.028   CD244 natural killer cell receptor 2B4 
HEPACAM               0.024   hepatocyte cell adhesion molecule 
HEPACAM2              0.023   HEPACAM family member 2 isoform 1 
SLAMF1                0.021   signaling lymphocytic activation molecule family memb...
HEPACAM2              0.019   HEPACAM family member 2 isoform 2 
CEACAM5               0.019   carcinoembryonic antigen-related cell adhesion molec...
GPA33                 0.018   transmembrane glycoprotein A33 precursor 
HMCN1                 0.017   hemicentin 1 
CEACAM21              0.015   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.015   carcinoembryonic antigen-related cell adhesion mole...
CEACAM6               0.015   carcinoembryonic antigen-related cell adhesion molec...
NEGR1                 0.014   neuronal growth regulator 1 
CD2                   0.014   CD2 molecule 
CEACAM8               0.014   carcinoembryonic antigen-related cell adhesion molec...
SLAMF8                0.014   SLAM family member 8 
NCAM1                 0.014   neural cell adhesion molecule 1 isoform 2 
OPCML                 0.013   opioid binding protein/cell adhesion molecule-like i...
CEACAM7               0.013   carcinoembryonic antigen-related cell adhesion molecu...
PSG3                  0.012   pregnancy specific beta-1-glycoprotein 3 
NCAM1                 0.012   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.012   neural cell adhesion molecule 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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