NCAM1 1608

Name: NCAM1	Sequence: fasta or formatted (858aa)		NCBI GI: 115529482
Description: neural cell adhesion molecule 1 isoform 2		Referenced in: Protein Glycosylation Neurons
Other entries for this name: alt prot [761aa] neural cell adhesion molecule 1 isoform 3 alt prot [848aa] neural cell adhesion molecule 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 62 2 C cysteine 1.7 15 1 D aspartate 5.4 46 2 E glutamate 9.1 78 3 F phenylalanine 2.9 25 2 G glycine 6.5 56 2 H histidine 1.2 10 1 I isoleucine 6.8 58 2 K lysine 6.8 58 2 L leucine 5.9 51 3 M methionine 1.3 11 1 N asparagine 4.7 40 2 P proline 5.5 47 2 Q glutamine 4.8 41 2 R arginine 2.9 25 1 S serine 7.8 67 3 T threonine 7.1 61 2 V valine 7.8 67 3 W tryptophan 1.6 14 1 Y tyrosine 3.0 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neural cell adhesion molecule 1 isoform 2 NCAM1 0.982 neural cell adhesion molecule 1 isoform 1 NCAM1 0.798 neural cell adhesion molecule 1 isoform 3 NCAM2 0.400 neural cell adhesion molecule 2 precursor HMCN1 0.082 hemicentin 1 ROBO2 0.080 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.080 roundabout, axon guidance receptor, homolog 2 isofor... ROBO1 0.076 roundabout 1 isoform b ROBO1 0.076 roundabout 1 isoform a ROBO1 0.073 roundabout 1 isoform d ROBO1 0.073 roundabout 1 isoform c LOC642132 0.073 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.073 PREDICTED: similar to roundabout 1 isoform 2 HMCN2 0.073 PREDICTED: hemicentin 2 HMCN2 0.072 PREDICTED: hemicentin 2 HMCN2 0.072 PREDICTED: hemicentin 2 TTN 0.071 titin isoform N2-A DSCAM 0.070 Down syndrome cell adhesion molecule isoform CHD2-42... DCC 0.069 deleted in colorectal carcinoma ROBO3 0.069 roundabout, axon guidance receptor, homolog 3 NEO1 0.068 neogenin homolog 1 PXDN 0.066 peroxidasin LOC100292387 0.065 PREDICTED: similar to hemicentin 2 CDON 0.064 surface glycoprotein, Ig superfamily member SDK2 0.063 sidekick 2 SDK1 0.061 sidekick 1 DSCAML1 0.060 Down syndrome cell adhesion molecule like 1 L1CAM 0.059 L1 cell adhesion molecule isoform 3 precursor [Homo... L1CAM 0.059 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.059 L1 cell adhesion molecule isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.