Guide to the Human Genome
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Name: SLAMF9 Sequence: fasta or formatted (289aa) NCBI GI: 226342990
Description:

SLAM family member 9 isoform 1

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [198aa] SLAM family member 9 isoform 2
alt prot [111aa] SLAM family member 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         16           1
 C cysteine            2.8          8           1
 D aspartate           2.8          8           1
 E glutamate           5.9         17           2
 F phenylalanine       2.4          7           1
 G glycine             5.5         16           1
 H histidine           2.1          6           1
 I isoleucine          4.8         14           2
 K lysine              4.2         12           2
 L leucine            11.4         33           7
 M methionine          3.8         11           1
 N asparagine          3.8         11           2
 P proline             6.9         20           2
 Q glutamine           4.2         12           2
 R arginine            4.8         14           2
 S serine             12.1         35           2
 T threonine           4.2         12           1
 V valine              6.2         18           2
 W tryptophan          3.1          9           1
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SLAM family member 9 isoform 1 
SLAMF9                0.430   SLAM family member 9 isoform 2 
SLAMF9                0.274   SLAM family member 9 isoform 3 
CD84                  0.204   CD84 molecule 
LY9                   0.186   lymphocyte antigen 9 isoform a 
SLAMF7                0.170   SLAM family member 7 
SLAMF6                0.142   activating NK receptor precursor 
LY9                   0.081   lymphocyte antigen 9 isoform b 
SLAMF1                0.061   signaling lymphocytic activation molecule family memb...
HEPACAM2              0.051   HEPACAM family member 2 isoform 2 
HEPACAM2              0.051   HEPACAM family member 2 isoform 1 
HEPACAM               0.046   hepatocyte cell adhesion molecule 
CEACAM21              0.046   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.046   carcinoembryonic antigen-related cell adhesion mole...
CD244                 0.044   CD244 natural killer cell receptor 2B4 
SLAMF8                0.035   SLAM family member 8 
CEACAM5               0.026   carcinoembryonic antigen-related cell adhesion molec...
CD48                  0.021   CD48 molecule 
C17orf60              0.019   hypothetical protein LOC284021 
DCC                   0.016   deleted in colorectal carcinoma 
CD96                  0.014   CD96 antigen isoform 1 precursor 
SIGLEC8               0.014   sialic acid binding Ig-like lectin 8 
NEGR1                 0.014   neuronal growth regulator 1 
FCRL1                 0.014   Fc receptor-like 1 isoform 3 precursor 
FCRL1                 0.014   Fc receptor-like 1 isoform 2 precursor 
FCRL1                 0.014   Fc receptor-like 1 isoform 1 precursor 
MAP3K1                0.014   mitogen-activated protein kinase kinase kinase 1 [H...
CD86                  0.014   CD86 antigen isoform 2 precursor 
CD86                  0.014   CD86 antigen isoform 1 
CEACAM1               0.012   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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