Guide to the Human Genome
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Name: CEACAM7 Sequence: fasta or formatted (265aa) NCBI GI: 5901930
Description:

carcinoembryonic antigen-related cell adhesion molecule 7

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         15           1
 C cysteine            1.5          4           1
 D aspartate           2.6          7           1
 E glutamate           5.7         15           2
 F phenylalanine       2.3          6           1
 G glycine             5.7         15           1
 H histidine           1.9          5           1
 I isoleucine          5.7         15           2
 K lysine              2.6          7           1
 L leucine            10.2         27           3
 M methionine          1.1          3           1
 N asparagine         10.2         27           2
 P proline             6.8         18           2
 Q glutamine           4.2         11           1
 R arginine            3.4          9           1
 S serine              7.5         20           2
 T threonine           6.8         18           2
 V valine              9.8         26           2
 W tryptophan          1.9          5           2
 Y tyrosine            4.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carcinoembryonic antigen-related cell adhesion molecu... 
CEACAM1               0.610   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.610   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.581   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.577   carcinoembryonic antigen-related cell adhesion molec...
CEACAM8               0.573   carcinoembryonic antigen-related cell adhesion molec...
PSG5                  0.436   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.436   pregnancy specific beta-1-glycoprotein 5 
PSG1                  0.427   pregnancy specific beta-1-glycoprotein 1 
PSG8                  0.423   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.423   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG7                  0.421   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG6                  0.417   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.417   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG2                  0.413   pregnancy specific beta-1-glycoprotein 2 
PSG9                  0.413   pregnancy specific beta-1-glycoprotein 9 
PSG11                 0.413   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG4                  0.411   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG4                  0.411   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG3                  0.411   pregnancy specific beta-1-glycoprotein 3 
CEACAM21              0.373   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.369   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.326   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.222   carcinoembryonic antigen-related cell adhesion molec...
CEACAM16              0.201   carcinoembryonic antigen-related cell adhesion molec...
PSG8                  0.193   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG11                 0.170   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.170   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM20              0.118   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.118   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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