Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLAMF9 Sequence: fasta or formatted (198aa) NCBI GI: 226342992
Description:

SLAM family member 9 isoform 2

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [289aa] SLAM family member 9 isoform 1
alt prot [111aa] SLAM family member 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         11           1
 C cysteine            2.0          4           1
 D aspartate           1.5          3           1
 E glutamate           6.1         12           2
 F phenylalanine       2.0          4           1
 G glycine             4.5          9           1
 H histidine           3.0          6           1
 I isoleucine          5.6         11           2
 K lysine              5.6         11           2
 L leucine            14.1         28           7
 M methionine          4.0          8           1
 N asparagine          3.5          7           1
 P proline             6.6         13           2
 Q glutamine           5.6         11           2
 R arginine            5.1         10           2
 S serine              9.6         19           2
 T threonine           3.0          6           1
 V valine              6.6         13           2
 W tryptophan          3.0          6           1
 Y tyrosine            3.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SLAM family member 9 isoform 2 
SLAMF9                0.646   SLAM family member 9 isoform 1 
SLAMF9                0.412   SLAM family member 9 isoform 3 
LY9                   0.127   lymphocyte antigen 9 isoform b 
CD84                  0.127   CD84 molecule 
LY9                   0.121   lymphocyte antigen 9 isoform a 
SLAMF6                0.108   activating NK receptor precursor 
SLAMF7                0.066   SLAM family member 7 
CEACAM21              0.032   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.032   carcinoembryonic antigen-related cell adhesion mole...
CD86                  0.018   CD86 antigen isoform 2 precursor 
CD86                  0.018   CD86 antigen isoform 1 
C17orf60              0.018   hypothetical protein LOC284021 
SFXN5                 0.013   sideroflexin 5 
HEPACAM2              0.013   HEPACAM family member 2 isoform 2 
HEPACAM2              0.013   HEPACAM family member 2 isoform 1 
C2CD3                 0.011   C2 calcium-dependent domain containing 3 
PLEKHG2               0.011   common-site lymphoma/leukemia guanine nucleotide ex...
ATL2                  0.008   atlastin GTPase 2 isoform 2 
ATL2                  0.008   atlastin GTPase 2 isoform 1 
PDGFRA                0.008   platelet-derived growth factor receptor alpha precurs...
IL23R                 0.008   interleukin 23 receptor precursor 
EFCAB8                0.008   EF-hand calcium binding domain 8 
LSR                   0.008   LISCH protein isoform 3 
LSR                   0.008   LISCH protein isoform 2 
LSR                   0.008   LISCH protein isoform 1 
ILDR2                 0.008   immunoglobulin-like domain containing receptor 2 [Ho...
STIM1                 0.005   stromal interaction molecule 1 precursor 
LPIN1                 0.005   lipin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press