HMCN1 2173

Name: HMCN1	Sequence: fasta or formatted (5635aa)		NCBI GI: 118572606
Description: hemicentin 1		Referenced in: Protein Composition and Structure Epidermal Growth Factor Gene Structure Additional Immunoglobulin-related Receptors Extracellular Matrix Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 351 2 C cysteine 3.2 180 1 D aspartate 4.7 265 3 E glutamate 5.5 311 2 F phenylalanine 2.1 117 2 G glycine 7.8 437 3 H histidine 2.2 124 2 I isoleucine 6.7 375 2 K lysine 4.6 262 3 L leucine 7.6 430 3 M methionine 1.3 73 1 N asparagine 5.4 306 3 P proline 6.9 386 3 Q glutamine 4.1 231 2 R arginine 4.4 249 3 S serine 7.8 440 3 T threonine 7.2 403 2 V valine 8.1 457 3 W tryptophan 1.3 74 1 Y tyrosine 2.9 164 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hemicentin 1 HMCN2 0.307 PREDICTED: hemicentin 2 HMCN2 0.210 PREDICTED: hemicentin 2 HMCN2 0.207 PREDICTED: hemicentin 2 TTN 0.107 titin isoform N2-A LOC100292387 0.080 PREDICTED: similar to hemicentin 2 LOC100289200 0.066 PREDICTED: hypothetical protein XP_002342997 OBSCN 0.047 obscurin, cytoskeletal calmodulin and titin-interact... OBSCN 0.047 obscurin, cytoskeletal calmodulin and titin-interac... HSPG2 0.043 heparan sulfate proteoglycan 2 IGSF10 0.027 immunoglobulin superfamily, member 10 MXRA5 0.026 adlican TTN 0.026 titin isoform novex-1 TTN 0.025 titin isoform N2-B OBSL1 0.024 obscurin-like 1 TTN 0.024 titin isoform novex-2 TTN 0.023 titin isoform novex-3 FBLN1 0.023 fibulin 1 isoform D FBLN2 0.022 fibulin 2 isoform a precursor FBLN2 0.022 fibulin 2 isoform b precursor FBLN1 0.022 fibulin 1 isoform C precursor SEMA5A 0.021 semaphorin 5A FBLN1 0.021 fibulin 1 isoform B precursor FBLN1 0.021 fibulin 1 isoform A precursor SEMA5B 0.021 semaphorin 5B isoform 1 FBN1 0.020 fibrillin 1 precursor FBN2 0.020 fibrillin 2 precursor FBN3 0.020 fibrillin 3 precursor BAI1 0.019 brain-specific angiogenesis inhibitor 1 precursor [... LTBP4 0.019 latent transforming growth factor beta binding prot... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.