Guide to the Human Genome
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Name: OR52A4 Sequence: fasta or formatted (304aa) NCBI GI: 52421343
Description:

olfactory receptor, family 52, subfamily A, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         16           1
 C cysteine            3.3         10           1
 D aspartate           2.3          7           1
 E glutamate           2.6          8           1
 F phenylalanine       8.2         25           3
 G glycine             4.6         14           2
 H histidine           3.0          9           1
 I isoleucine         13.2         40           3
 K lysine              3.3         10           1
 L leucine            14.1         43           3
 M methionine          2.0          6           1
 N asparagine          1.3          4           1
 P proline             5.9         18           1
 Q glutamine           3.3         10           1
 R arginine            2.6          8           2
 S serine              3.6         11           1
 T threonine           6.9         21           1
 V valine              7.2         22           2
 W tryptophan          1.6          5           1
 Y tyrosine            5.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily A, member 4... 
OR52A5                0.588   olfactory receptor, family 52, subfamily A, member 5...
OR52A1                0.588   olfactory receptor, family 52, subfamily A, member ...
OR52N4                0.348   olfactory receptor, family 52, subfamily N, member ...
OR52E2                0.343   olfactory receptor, family 52, subfamily E, member 2...
OR52E8                0.332   olfactory receptor, family 52, subfamily E, member 8...
OR52K2                0.328   olfactory receptor, family 52, subfamily K, member 2...
OR52N1                0.328   olfactory receptor, family 52, subfamily N, member 1...
OR51E1                0.328   olfactory receptor, family 51, subfamily E, member ...
OR52R1                0.328   olfactory receptor, family 52, subfamily R, member ...
OR52E4                0.328   olfactory receptor, family 52, subfamily E, member 4...
OR52M1                0.327   olfactory receptor, family 52, subfamily M, member 1...
OR52N2                0.325   olfactory receptor, family 52, subfamily N, member 2...
OR52J3                0.323   olfactory receptor, family 52, subfamily J, member ...
OR51E2                0.320   olfactory receptor, family 51, subfamily E, member 2...
OR52E6                0.320   olfactory receptor, family 52, subfamily E, member 6...
OR52K1                0.318   olfactory receptor, family 52, subfamily K, member 1...
OR52D1                0.312   olfactory receptor, family 52, subfamily D, member 1...
OR52H1                0.310   olfactory receptor, family 52, subfamily H, member 1...
OR51F2                0.308   olfactory receptor, family 51, subfamily F, member 2...
OR52B2                0.305   olfactory receptor, family 52, subfamily B, member 2...
OR52N5                0.305   olfactory receptor, family 52, subfamily N, member 5...
OR52B6                0.300   olfactory receptor, family 52, subfamily B, member ...
OR51I2                0.295   olfactory receptor, family 51, subfamily I, member 2...
OR51I1                0.293   olfactory receptor, family 51, subfamily I, member 1...
OR52B4                0.290   olfactory receptor, family 52, subfamily B, member 4...
OR52L1                0.288   olfactory receptor, family 52, subfamily L, member ...
OR51F1                0.280   olfactory receptor, family 51, subfamily F, member 1...
OR52I2                0.276   olfactory receptor, family 52, subfamily I, member 2...
OR51D1                0.273   olfactory receptor, family 51, subfamily D, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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