Guide to the Human Genome
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Name: OR52K1 Sequence: fasta or formatted (314aa) NCBI GI: 52353258
Description:

olfactory receptor, family 52, subfamily K, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         33           2
 C cysteine            2.9          9           1
 D aspartate           1.9          6           1
 E glutamate           2.2          7           1
 F phenylalanine       7.3         23           2
 G glycine             3.5         11           1
 H histidine           4.1         13           1
 I isoleucine          8.6         27           2
 K lysine              2.2          7           1
 L leucine            14.0         44           2
 M methionine          4.5         14           1
 N asparagine          2.2          7           2
 P proline             4.8         15           2
 Q glutamine           2.2          7           1
 R arginine            4.1         13           2
 S serine              5.4         17           2
 T threonine           5.7         18           2
 V valine              8.6         27           2
 W tryptophan          1.0          3           1
 Y tyrosine            4.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily K, member 1... 
OR52K2                0.889   olfactory receptor, family 52, subfamily K, member 2...
OR51G2                0.530   olfactory receptor, family 51, subfamily G, member 2...
OR52E8                0.512   olfactory receptor, family 52, subfamily E, member 8...
OR52N4                0.512   olfactory receptor, family 52, subfamily N, member ...
OR52J3                0.508   olfactory receptor, family 52, subfamily J, member ...
OR51E2                0.498   olfactory receptor, family 51, subfamily E, member 2...
OR52L1                0.497   olfactory receptor, family 52, subfamily L, member ...
OR52D1                0.497   olfactory receptor, family 52, subfamily D, member 1...
OR51L1                0.495   olfactory receptor, family 51, subfamily L, member 1...
OR52M1                0.493   olfactory receptor, family 52, subfamily M, member 1...
OR51G1                0.490   olfactory receptor, family 51, subfamily G, member 1...
OR52E4                0.490   olfactory receptor, family 52, subfamily E, member 4...
OR52R1                0.487   olfactory receptor, family 52, subfamily R, member ...
OR52B2                0.487   olfactory receptor, family 52, subfamily B, member 2...
OR52N2                0.485   olfactory receptor, family 52, subfamily N, member 2...
OR51E1                0.485   olfactory receptor, family 51, subfamily E, member ...
OR52N1                0.480   olfactory receptor, family 52, subfamily N, member 1...
OR51D1                0.478   olfactory receptor, family 51, subfamily D, member 1...
OR51I2                0.477   olfactory receptor, family 51, subfamily I, member 2...
OR52N5                0.475   olfactory receptor, family 52, subfamily N, member 5...
OR52H1                0.475   olfactory receptor, family 52, subfamily H, member 1...
OR52E2                0.473   olfactory receptor, family 52, subfamily E, member 2...
OR51A7                0.468   olfactory receptor, family 51, subfamily A, member 7...
OR52E6                0.468   olfactory receptor, family 52, subfamily E, member 6...
OR51M1                0.468   olfactory receptor, family 51, subfamily M, member 1...
OR51F2                0.467   olfactory receptor, family 51, subfamily F, member 2...
OR52B6                0.463   olfactory receptor, family 52, subfamily B, member ...
OR51I1                0.460   olfactory receptor, family 51, subfamily I, member 1...
OR52A1                0.458   olfactory receptor, family 52, subfamily A, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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