Guide to the Human Genome
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Name: OR52B2 Sequence: fasta or formatted (323aa) NCBI GI: 53828683
Description:

olfactory receptor, family 52, subfamily B, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         26           1
 C cysteine            3.4         11           2
 D aspartate           2.2          7           1
 E glutamate           1.5          5           1
 F phenylalanine       7.1         23           2
 G glycine             4.0         13           1
 H histidine           4.6         15           2
 I isoleucine         10.5         34           2
 K lysine              1.9          6           1
 L leucine            12.1         39           2
 M methionine          3.4         11           2
 N asparagine          2.8          9           1
 P proline             5.9         19           2
 Q glutamine           1.5          5           1
 R arginine            4.0         13           1
 S serine              5.3         17           1
 T threonine           5.9         19           3
 V valine             11.1         36           2
 W tryptophan          1.5          5           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily B, member 2... 
OR52H1                0.607   olfactory receptor, family 52, subfamily H, member 1...
OR52B4                0.556   olfactory receptor, family 52, subfamily B, member 4...
OR52B6                0.553   olfactory receptor, family 52, subfamily B, member ...
OR52D1                0.552   olfactory receptor, family 52, subfamily D, member 1...
OR52E4                0.540   olfactory receptor, family 52, subfamily E, member 4...
OR52E8                0.531   olfactory receptor, family 52, subfamily E, member 8...
OR52E2                0.518   olfactory receptor, family 52, subfamily E, member 2...
OR52J3                0.518   olfactory receptor, family 52, subfamily J, member ...
OR52N2                0.502   olfactory receptor, family 52, subfamily N, member 2...
OR52E6                0.493   olfactory receptor, family 52, subfamily E, member 6...
OR52K2                0.471   olfactory receptor, family 52, subfamily K, member 2...
OR52N1                0.466   olfactory receptor, family 52, subfamily N, member 1...
OR52N4                0.464   olfactory receptor, family 52, subfamily N, member ...
OR52K1                0.464   olfactory receptor, family 52, subfamily K, member 1...
OR52N5                0.463   olfactory receptor, family 52, subfamily N, member 5...
OR51I2                0.461   olfactory receptor, family 51, subfamily I, member 2...
OR52M1                0.461   olfactory receptor, family 52, subfamily M, member 1...
OR51G2                0.455   olfactory receptor, family 51, subfamily G, member 2...
OR52R1                0.453   olfactory receptor, family 52, subfamily R, member ...
OR52L1                0.452   olfactory receptor, family 52, subfamily L, member ...
OR52A5                0.444   olfactory receptor, family 52, subfamily A, member 5...
OR51E2                0.433   olfactory receptor, family 51, subfamily E, member 2...
OR51E1                0.431   olfactory receptor, family 51, subfamily E, member ...
OR52A1                0.428   olfactory receptor, family 52, subfamily A, member ...
OR51F2                0.426   olfactory receptor, family 51, subfamily F, member 2...
OR51L1                0.423   olfactory receptor, family 51, subfamily L, member 1...
OR51I1                0.420   olfactory receptor, family 51, subfamily I, member 1...
OR51G1                0.418   olfactory receptor, family 51, subfamily G, member 1...
OR52I1                0.412   olfactory receptor, family 52, subfamily I, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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