Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR52I2 Sequence: fasta or formatted (350aa) NCBI GI: 52353330
Description:

olfactory receptor, family 52, subfamily I, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         33           2
 C cysteine            3.4         12           1
 D aspartate           2.9         10           1
 E glutamate           1.4          5           1
 F phenylalanine       3.4         12           2
 G glycine             4.9         17           1
 H histidine           4.0         14           2
 I isoleucine          9.1         32           2
 K lysine              2.6          9           2
 L leucine            13.4         47           3
 M methionine          5.4         19           1
 N asparagine          1.7          6           1
 P proline             4.3         15           1
 Q glutamine           2.6          9           2
 R arginine            2.9         10           1
 S serine             10.0         35           2
 T threonine           4.9         17           1
 V valine              8.3         29           3
 W tryptophan          1.4          5           1
 Y tyrosine            4.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily I, member 2... 
OR52I1                0.885   olfactory receptor, family 52, subfamily I, member 1...
OR52J3                0.393   olfactory receptor, family 52, subfamily J, member ...
OR52D1                0.389   olfactory receptor, family 52, subfamily D, member 1...
OR52B2                0.385   olfactory receptor, family 52, subfamily B, member 2...
OR52E8                0.385   olfactory receptor, family 52, subfamily E, member 8...
OR52E4                0.379   olfactory receptor, family 52, subfamily E, member 4...
OR52K2                0.371   olfactory receptor, family 52, subfamily K, member 2...
OR52E2                0.370   olfactory receptor, family 52, subfamily E, member 2...
OR52H1                0.365   olfactory receptor, family 52, subfamily H, member 1...
OR51E2                0.362   olfactory receptor, family 51, subfamily E, member 2...
OR52L1                0.362   olfactory receptor, family 52, subfamily L, member ...
OR52E6                0.359   olfactory receptor, family 52, subfamily E, member 6...
OR52K1                0.358   olfactory receptor, family 52, subfamily K, member 1...
OR52B6                0.355   olfactory receptor, family 52, subfamily B, member ...
OR52M1                0.355   olfactory receptor, family 52, subfamily M, member 1...
OR51I2                0.352   olfactory receptor, family 51, subfamily I, member 2...
OR52N4                0.352   olfactory receptor, family 52, subfamily N, member ...
OR52R1                0.352   olfactory receptor, family 52, subfamily R, member ...
OR52N1                0.350   olfactory receptor, family 52, subfamily N, member 1...
OR52N5                0.340   olfactory receptor, family 52, subfamily N, member 5...
OR52N2                0.338   olfactory receptor, family 52, subfamily N, member 2...
OR51E1                0.332   olfactory receptor, family 51, subfamily E, member ...
OR52A5                0.331   olfactory receptor, family 52, subfamily A, member 5...
OR51G2                0.328   olfactory receptor, family 51, subfamily G, member 2...
OR52B4                0.326   olfactory receptor, family 52, subfamily B, member 4...
OR51L1                0.323   olfactory receptor, family 51, subfamily L, member 1...
OR52W1                0.320   olfactory receptor, family 52, subfamily W, member 1...
OR51I1                0.311   olfactory receptor, family 51, subfamily I, member 1...
OR52A1                0.311   olfactory receptor, family 52, subfamily A, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press