Guide to the Human Genome
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Name: OR52M1 Sequence: fasta or formatted (317aa) NCBI GI: 51921275
Description:

olfactory receptor, family 52, subfamily M, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         23           2
 C cysteine            3.5         11           1
 D aspartate           1.9          6           1
 E glutamate           2.2          7           1
 F phenylalanine       5.0         16           2
 G glycine             6.0         19           1
 H histidine           3.5         11           1
 I isoleucine          9.1         29           1
 K lysine              1.9          6           1
 L leucine            15.1         48           2
 M methionine          3.8         12           1
 N asparagine          2.2          7           2
 P proline             5.7         18           3
 Q glutamine           1.6          5           1
 R arginine            4.7         15           1
 S serine              6.9         22           2
 T threonine           4.7         15           1
 V valine             10.1         32           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily M, member 1... 
OR52K2                0.504   olfactory receptor, family 52, subfamily K, member 2...
OR51G2                0.494   olfactory receptor, family 51, subfamily G, member 2...
OR52A5                0.493   olfactory receptor, family 52, subfamily A, member 5...
OR52R1                0.488   olfactory receptor, family 52, subfamily R, member ...
OR51E1                0.488   olfactory receptor, family 51, subfamily E, member ...
OR52K1                0.488   olfactory receptor, family 52, subfamily K, member 1...
OR52N4                0.484   olfactory receptor, family 52, subfamily N, member ...
OR52D1                0.481   olfactory receptor, family 52, subfamily D, member 1...
OR52J3                0.479   olfactory receptor, family 52, subfamily J, member ...
OR52E2                0.478   olfactory receptor, family 52, subfamily E, member 2...
OR52B2                0.478   olfactory receptor, family 52, subfamily B, member 2...
OR52E4                0.476   olfactory receptor, family 52, subfamily E, member 4...
OR51E2                0.473   olfactory receptor, family 51, subfamily E, member 2...
OR52L1                0.471   olfactory receptor, family 52, subfamily L, member ...
OR52E8                0.468   olfactory receptor, family 52, subfamily E, member 8...
OR51L1                0.458   olfactory receptor, family 51, subfamily L, member 1...
OR51G1                0.453   olfactory receptor, family 51, subfamily G, member 1...
OR51I2                0.453   olfactory receptor, family 51, subfamily I, member 2...
OR52N5                0.453   olfactory receptor, family 52, subfamily N, member 5...
OR51F2                0.452   olfactory receptor, family 51, subfamily F, member 2...
OR52A1                0.450   olfactory receptor, family 52, subfamily A, member ...
OR52N2                0.447   olfactory receptor, family 52, subfamily N, member 2...
OR51A4                0.437   olfactory receptor, family 51, subfamily A, member 4...
OR51D1                0.435   olfactory receptor, family 51, subfamily D, member 1...
OR52E6                0.433   olfactory receptor, family 52, subfamily E, member 6...
OR52N1                0.432   olfactory receptor, family 52, subfamily N, member 1...
OR51I1                0.430   olfactory receptor, family 51, subfamily I, member 1...
OR51M1                0.430   olfactory receptor, family 51, subfamily M, member 1...
OR52H1                0.429   olfactory receptor, family 52, subfamily H, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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