Guide to the Human Genome
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Name: OR52L1 Sequence: fasta or formatted (329aa) NCBI GI: 221219015
Description:

olfactory receptor, family 52, subfamily L, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         26           2
 C cysteine            2.7          9           1
 D aspartate           1.5          5           1
 E glutamate           2.1          7           2
 F phenylalanine       5.2         17           2
 G glycine             6.1         20           1
 H histidine           5.8         19           2
 I isoleucine          8.5         28           2
 K lysine              2.4          8           1
 L leucine            17.0         56           4
 M methionine          3.6         12           1
 N asparagine          1.2          4           1
 P proline             4.9         16           2
 Q glutamine           3.0         10           2
 R arginine            2.4          8           1
 S serine              7.3         24           2
 T threonine           4.0         13           2
 V valine             10.0         33           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily L, member ... 
OR52R1                0.539   olfactory receptor, family 52, subfamily R, member ...
OR52D1                0.488   olfactory receptor, family 52, subfamily D, member 1...
OR52K2                0.479   olfactory receptor, family 52, subfamily K, member 2...
OR52J3                0.479   olfactory receptor, family 52, subfamily J, member ...
OR52N4                0.477   olfactory receptor, family 52, subfamily N, member ...
OR52K1                0.474   olfactory receptor, family 52, subfamily K, member 1...
OR52E4                0.468   olfactory receptor, family 52, subfamily E, member 4...
OR52W1                0.464   olfactory receptor, family 52, subfamily W, member 1...
OR52N1                0.456   olfactory receptor, family 52, subfamily N, member 1...
OR52E8                0.456   olfactory receptor, family 52, subfamily E, member 8...
OR52M1                0.455   olfactory receptor, family 52, subfamily M, member 1...
OR52B2                0.452   olfactory receptor, family 52, subfamily B, member 2...
OR51E2                0.448   olfactory receptor, family 51, subfamily E, member 2...
OR52E2                0.448   olfactory receptor, family 52, subfamily E, member 2...
OR52N5                0.445   olfactory receptor, family 52, subfamily N, member 5...
OR52A5                0.444   olfactory receptor, family 52, subfamily A, member 5...
OR51E1                0.437   olfactory receptor, family 51, subfamily E, member ...
OR52H1                0.436   olfactory receptor, family 52, subfamily H, member 1...
OR51G2                0.431   olfactory receptor, family 51, subfamily G, member 2...
OR52N2                0.431   olfactory receptor, family 52, subfamily N, member 2...
OR51G1                0.429   olfactory receptor, family 51, subfamily G, member 1...
OR52A1                0.429   olfactory receptor, family 52, subfamily A, member ...
OR51L1                0.422   olfactory receptor, family 51, subfamily L, member 1...
OR52E6                0.422   olfactory receptor, family 52, subfamily E, member 6...
OR51D1                0.420   olfactory receptor, family 51, subfamily D, member 1...
OR52B6                0.412   olfactory receptor, family 52, subfamily B, member ...
OR51I2                0.409   olfactory receptor, family 51, subfamily I, member 2...
OR51F2                0.404   olfactory receptor, family 51, subfamily F, member 2...
OR51I1                0.399   olfactory receptor, family 51, subfamily I, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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