Guide to the Human Genome
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Name: OR52H1 Sequence: fasta or formatted (320aa) NCBI GI: 52627166
Description:

olfactory receptor, family 52, subfamily H, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         24           1
 C cysteine            4.4         14           1
 D aspartate           2.5          8           1
 E glutamate           1.6          5           1
 F phenylalanine       8.4         27           3
 G glycine             5.6         18           1
 H histidine           3.8         12           1
 I isoleucine         12.2         39           2
 K lysine              2.5          8           1
 L leucine            10.6         34           2
 M methionine          4.1         13           1
 N asparagine          2.5          8           1
 P proline             5.9         19           2
 Q glutamine           1.9          6           1
 R arginine            2.5          8           1
 S serine              6.6         21           2
 T threonine           5.3         17           2
 V valine              7.5         24           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily H, member 1... 
OR52B2                0.608   olfactory receptor, family 52, subfamily B, member 2...
OR52E8                0.541   olfactory receptor, family 52, subfamily E, member 8...
OR52E2                0.540   olfactory receptor, family 52, subfamily E, member 2...
OR52E4                0.535   olfactory receptor, family 52, subfamily E, member 4...
OR52B6                0.513   olfactory receptor, family 52, subfamily B, member ...
OR52B4                0.508   olfactory receptor, family 52, subfamily B, member 4...
OR52D1                0.508   olfactory receptor, family 52, subfamily D, member 1...
OR52J3                0.495   olfactory receptor, family 52, subfamily J, member ...
OR52E6                0.495   olfactory receptor, family 52, subfamily E, member 6...
OR52N4                0.479   olfactory receptor, family 52, subfamily N, member ...
OR52R1                0.473   olfactory receptor, family 52, subfamily R, member ...
OR52N2                0.468   olfactory receptor, family 52, subfamily N, member 2...
OR52K2                0.465   olfactory receptor, family 52, subfamily K, member 2...
OR52K1                0.454   olfactory receptor, family 52, subfamily K, member 1...
OR52N1                0.452   olfactory receptor, family 52, subfamily N, member 1...
OR52N5                0.452   olfactory receptor, family 52, subfamily N, member 5...
OR52A5                0.440   olfactory receptor, family 52, subfamily A, member 5...
OR52L1                0.437   olfactory receptor, family 52, subfamily L, member ...
OR52A1                0.424   olfactory receptor, family 52, subfamily A, member ...
OR51I2                0.417   olfactory receptor, family 51, subfamily I, member 2...
OR51G2                0.417   olfactory receptor, family 51, subfamily G, member 2...
OR52M1                0.414   olfactory receptor, family 52, subfamily M, member 1...
OR51E1                0.410   olfactory receptor, family 51, subfamily E, member ...
OR51G1                0.406   olfactory receptor, family 51, subfamily G, member 1...
OR51F2                0.397   olfactory receptor, family 51, subfamily F, member 2...
OR51A4                0.395   olfactory receptor, family 51, subfamily A, member 4...
OR51E2                0.394   olfactory receptor, family 51, subfamily E, member 2...
OR52I2                0.389   olfactory receptor, family 52, subfamily I, member 2...
OR51V1                0.387   olfactory receptor, family 51, subfamily V, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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