SF3B4 31527

Name: SF3B4	Sequence: fasta or formatted (424aa)		NCBI GI: 5032069
Description: splicing factor 3b, subunit 4		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 33 2 C cysteine 0.2 1 1 D aspartate 3.8 16 1 E glutamate 2.8 12 2 F phenylalanine 3.3 14 1 G glycine 13.0 55 2 H histidine 5.0 21 2 I isoleucine 3.3 14 1 K lysine 3.1 13 2 L leucine 6.1 26 2 M methionine 4.5 19 1 N asparagine 3.3 14 1 P proline 22.6 96 4 Q glutamine 3.3 14 1 R arginine 4.0 17 1 S serine 5.2 22 2 T threonine 2.4 10 1 V valine 3.5 15 2 W tryptophan 0.2 1 1 Y tyrosine 2.6 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor 3b, subunit 4 FMN2 0.113 formin 2 PABPC4 0.111 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.111 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.111 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC1 0.106 poly(A) binding protein, cytoplasmic 1 PABPC4L 0.104 poly(A) binding protein, cytoplasmic 4-like PRB2 0.102 proline-rich protein BstNI subfamily 2 PABPC3 0.099 poly(A) binding protein, cytoplasmic 3 PRB1 0.099 proline-rich protein BstNI subfamily 1 isoform 1 pre... PABPC1L 0.094 poly(A)-binding protein, cytoplasmic 1-like PABPC5 0.094 poly(A) binding protein, cytoplasmic 5 PRB3 0.093 proline-rich protein BstNI subfamily 3 precursor [H... DIAPH1 0.091 diaphanous 1 isoform 2 DIAPH1 0.091 diaphanous 1 isoform 1 WBP11 0.090 WW domain binding protein 11 PABPC1L2B 0.089 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.089 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... PRB4 0.088 proline-rich protein BstNI subfamily 4 precursor [Ho... TIA1 0.083 TIA1 protein isoform 1 TIAL1 0.083 TIA-1 related protein isoform 1 SF1 0.082 splicing factor 1 isoform 3 SF1 0.082 splicing factor 1 isoform 2 SF1 0.082 splicing factor 1 isoform 1 MAPK1IP1L 0.082 MAPK-interacting and spindle-stabilizing protein [Ho... TIAL1 0.080 TIA-1 related protein isoform 2 CPSF6 0.080 cleavage and polyadenylation specific factor 6, 68 ... FLJ22184 0.080 PREDICTED: hypothetical protein FLJ22184 SFRS15 0.080 splicing factor, arginine/serine-rich 15 isoform 3 ... CCNK 0.079 cyclin K isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.