CPSF6 6560

Name: CPSF6	Sequence: fasta or formatted (551aa)		NCBI GI: 162329583
Description: cleavage and polyadenylation specific factor 6, 68 kD subunit		Referenced in: Polyadenylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 33 2 C cysteine 0.5 3 1 D aspartate 7.1 39 2 E glutamate 5.3 29 2 F phenylalanine 2.9 16 2 G glycine 11.8 65 2 H histidine 2.2 12 1 I isoleucine 2.9 16 1 K lysine 2.9 16 2 L leucine 5.3 29 2 M methionine 1.5 8 1 N asparagine 2.7 15 2 P proline 18.5 102 5 Q glutamine 3.3 18 2 R arginine 9.1 50 2 S serine 7.3 40 3 T threonine 3.6 20 2 V valine 4.0 22 2 W tryptophan 0.4 2 2 Y tyrosine 2.9 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cleavage and polyadenylation specific factor 6, 68 ... CPSF7 0.293 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... CPSF7 0.292 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... CPSF7 0.292 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... FMN2 0.100 formin 2 PRB1 0.095 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.095 proline-rich protein BstNI subfamily 2 WBP11 0.082 WW domain binding protein 11 DIAPH1 0.082 diaphanous 1 isoform 2 DIAPH1 0.082 diaphanous 1 isoform 1 PRB3 0.082 proline-rich protein BstNI subfamily 3 precursor [H... PRB1 0.076 proline-rich protein BstNI subfamily 1 isoform 2 pre... SFPQ 0.074 splicing factor proline/glutamine rich (polypyrimidin... WIPF1 0.072 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.072 WAS/WASL interacting protein family, member 1 SF3A2 0.072 splicing factor 3a, subunit 2 PRB4 0.072 proline-rich protein BstNI subfamily 4 precursor [Ho... COL4A5 0.071 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.071 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.071 type IV collagen alpha 5 isoform 3 precursor CCNK 0.070 cyclin K isoform 1 COL17A1 0.069 alpha 1 type XVII collagen WIPF3 0.069 WAS/WASL interacting protein family, member 3 [Homo... COL5A1 0.069 alpha 1 type V collagen preproprotein COL3A1 0.068 collagen type III alpha 1 preproprotein YLPM1 0.068 YLP motif containing 1 COL8A1 0.067 alpha 1 type VIII collagen precursor COL8A1 0.067 alpha 1 type VIII collagen precursor SF1 0.067 splicing factor 1 isoform 1 FLJ22184 0.066 PREDICTED: hypothetical protein FLJ22184 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.