PABPC4 12267

Name: PABPC4	Sequence: fasta or formatted (631aa)		NCBI GI: 208431836
Description: poly A binding protein, cytoplasmic 4 isoform 3		Referenced in: Polyadenylation RNases and RNA Stability Small RNAs in RNA Processing
Other entries for this name: alt prot [660aa] poly A binding protein, cytoplasmic 4 isoform 1 alt prot [644aa] poly A binding protein, cytoplasmic 4 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 71 4 C cysteine 0.6 4 1 D aspartate 3.8 24 2 E glutamate 6.5 41 2 F phenylalanine 4.3 27 1 G glycine 7.0 44 2 H histidine 1.7 11 2 I isoleucine 3.8 24 2 K lysine 7.4 47 2 L leucine 7.3 46 2 M methionine 3.3 21 1 N asparagine 4.3 27 1 P proline 6.3 40 2 Q glutamine 5.9 37 2 R arginine 6.2 39 2 S serine 6.7 42 2 T threonine 3.6 23 3 V valine 6.8 43 2 W tryptophan 0.3 2 1 Y tyrosine 2.9 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.987 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC4 0.972 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC1 0.769 poly(A) binding protein, cytoplasmic 1 PABPC3 0.700 poly(A) binding protein, cytoplasmic 3 PABPC1L 0.635 poly(A)-binding protein, cytoplasmic 1-like PABPC4L 0.437 poly(A) binding protein, cytoplasmic 4-like PABPC5 0.380 poly(A) binding protein, cytoplasmic 5 PABPC1L2B 0.240 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.240 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... SF3B4 0.082 splicing factor 3b, subunit 4 LOC100291776 0.081 PREDICTED: similar to poly(A) binding protein, cyto... TIA1 0.074 TIA1 protein isoform 2 TIAL1 0.073 TIA-1 related protein isoform 1 TIA1 0.073 TIA1 protein isoform 1 NCL 0.072 nucleolin ELAVL1 0.071 ELAV-like 1 ELAVL3 0.070 ELAV-like protein 3 isoform 1 ELAVL3 0.070 ELAV-like protein 3 isoform 2 ELAVL2 0.070 ELAV (embryonic lethal, abnormal vision, Drosophila... TIAL1 0.069 TIA-1 related protein isoform 2 ELAVL4 0.068 ELAV-like 4 isoform 1 ELAVL4 0.067 ELAV-like 4 isoform 5 ELAVL4 0.067 ELAV-like 4 isoform 4 ELAVL4 0.067 ELAV-like 4 isoform 3 ELAVL4 0.067 ELAV-like 4 isoform 2 PUF60 0.066 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.066 poly-U binding splicing factor 60KDa isoform a [Homo... PUF60 0.063 poly-U binding splicing factor 60KDa isoform b [Homo... SYNCRIP 0.056 synaptotagmin binding, cytoplasmic RNA interacting ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.