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Search of human proteins with 5031995
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031995 prostate stem cell antigen preproprotein [Homo
sapiens]
(123 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 254 1e-68
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 60 3e-10
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 60 3e-10
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 55 1e-08
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 52 1e-07
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 52 1e-07
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 52 1e-07
gi|9966907 ARS component B precursor [Homo sapiens] 50 3e-07
gi|30794264 glycosylphosphatidylinositol anchored high density l... 45 2e-05
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 44 4e-05
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 44 4e-05
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 44 4e-05
gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens] 44 4e-05
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 43 5e-05
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 43 5e-05
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 43 5e-05
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 40 4e-04
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 39 0.001
gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens] 38 0.002
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 37 0.003
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 37 0.003
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 37 0.003
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 37 0.003
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 37 0.003
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 37 0.003
gi|13376874 lymphocyte antigen 6 complex G6C [Homo sapiens] 37 0.004
gi|161333839 activin A receptor, type IC isoform 4 [Homo sapiens] 35 0.019
gi|161333837 activin A receptor, type IC isoform 3 [Homo sapiens] 35 0.019
gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens] 35 0.019
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 35 0.019
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 254 bits (649), Expect = 1e-68
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT
Sbjct: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
Query: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQPAAAILALLPALGLLLWGP 120
VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQPAAAILALLPALGLLLWGP
Sbjct: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQPAAAILALLPALGLLLWGP 120
Query: 121 GQL 123
GQL
Sbjct: 121 GQL 123
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 60.5 bits (145), Expect = 3e-10
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA-VGLL 59
MK L LL A L ++ ++L+C+SC Q SN CL+ C+ C T A +G L
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 60 TV----ISKGCSLNC-VDDSQDYYVGKKNITCCDTDLCNASGAH-------ALQPAAAIL 107
+SK CS C + + + V I+CC + LCN S A L A +L
Sbjct: 61 VTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLL 120
Query: 108 ALLPALGLLLWGP 120
+LLPA LL +GP
Sbjct: 121 SLLPA--LLRFGP 131
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 60.5 bits (145), Expect = 3e-10
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA-VGLL 59
MK L LL A L ++ ++L+C+SC Q SN CL+ C+ C T A +G L
Sbjct: 1 MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNL 60
Query: 60 TV----ISKGCSLNC-VDDSQDYYVGKKNITCCDTDLCNASGAH-------ALQPAAAIL 107
+SK CS C + + + V I+CC + LCN S A L A +L
Sbjct: 61 VTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLL 120
Query: 108 ALLPALGLLLWGP 120
+LLPA LL +GP
Sbjct: 121 SLLPA--LLRFGP 131
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 55.5 bits (132), Expect = 1e-08
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 2 KAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLL-- 59
+ LLAL++A + AL CY C DC+ + CT C T +
Sbjct: 5 RLALLALVLAACG-ELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
Query: 60 ---TVISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQPA-AAILALLPALGL 115
+ ++K C+ C D ++CC+T+LCN GA AL L LLP L L
Sbjct: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLSL 123
Query: 116 LL 117
L
Sbjct: 124 RL 125
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 52.0 bits (123), Expect = 1e-07
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M +L +L+ + L AL C+ C + ++C C + C T R
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCA--YNGDNCFNPMRCPAMVAYCMTTRTYYTPTRM 58
Query: 61 VISKGCSLNCVDDSQDYYVGKKNIT-CCDTDLCNASGAHALQPAAAILALLPALGLLLWG 119
+SK C C + D Y + T CC DLCN +G A LAL P L LWG
Sbjct: 59 KVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGL----ATPATLALAPILLATLWG 114
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 52.0 bits (123), Expect = 1e-07
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M +L +L+ + L AL C+ C + ++C C + C T R
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCA--YNGDNCFNPMRCPAMVAYCMTTRTYYTPTRM 58
Query: 61 VISKGCSLNCVDDSQDYYVGKKNIT-CCDTDLCNASGAHALQPAAAILALLPALGLLLWG 119
+SK C C + D Y + T CC DLCN +G A LAL P L LWG
Sbjct: 59 KVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGL----ATPATLALAPILLATLWG 114
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 52.0 bits (123), Expect = 1e-07
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M +L +L+ + L AL C+ C + ++C C + C T R
Sbjct: 1 MTPLLTLILVVLMGLPLAQALDCHVCA--YNGDNCFNPMRCPAMVAYCMTTRTYYTPTRM 58
Query: 61 VISKGCSLNCVDDSQDYYVGKKNIT-CCDTDLCNASGAHALQPAAAILALLPALGLLLWG 119
+SK C C + D Y + T CC DLCN +G A LAL P L LWG
Sbjct: 59 KVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGL----ATPATLALAPILLATLWG 114
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 50.4 bits (119), Expect = 3e-07
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 8 LLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA-----VGLLTVI 62
LL+A ++ G AL CY+CK +++ C + C C T + V+
Sbjct: 10 LLVAAWSMGCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPVV 69
Query: 63 SKGCSLNCVDDSQDYYVGKKNITCCDTDLCNA 94
++ CS +CV D I CC DLCN+
Sbjct: 70 TRSCSSSCVATDPDSIGAAHLIFCCFRDLCNS 101
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 44.7 bits (104), Expect = 2e-05
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 21 LLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA---VGLLTVISKGCSLNCVDDSQDY 77
L CY+CK+ +E C +NC+ G+ C T GLLT S C+ +C ++
Sbjct: 63 LRCYTCKSLPRDERCNLTQNCSH-GQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKTV 121
Query: 78 YVGKKNITCCDTDLCN 93
+ +TCC + LCN
Sbjct: 122 EGTQVTMTCCQSSLCN 137
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 43.5 bits (101), Expect = 4e-05
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
MK + LALL L P L C C ++ C + C C + RI
Sbjct: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTP-KQCQPSDTVCASVRITDPSSSR 85
Query: 61 V---ISKGCSLNCVDDSQ----DYYVG-------KKNITCCDTDLCNASGAHALQPAAAI 106
++K C+ +C + DY +G K ++ CC+ DLCN + P A
Sbjct: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALA 145
Query: 107 LALLPALG-LLLW-GP 120
LL +LG LLW GP
Sbjct: 146 GGLLLSLGPALLWAGP 161
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 43.5 bits (101), Expect = 4e-05
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
MK + LALL L P L C C ++ C + C C + RI
Sbjct: 6 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTP-KQCQPSDTVCASVRITDPSSSR 64
Query: 61 V---ISKGCSLNCVDDSQ----DYYVG-------KKNITCCDTDLCNASGAHALQPAAAI 106
++K C+ +C + DY +G K ++ CC+ DLCN + P A
Sbjct: 65 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALA 124
Query: 107 LALLPALG-LLLW-GP 120
LL +LG LLW GP
Sbjct: 125 GGLLLSLGPALLWAGP 140
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 43.5 bits (101), Expect = 4e-05
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
MK + LALL L P L C C ++ C + C C + RI
Sbjct: 27 MKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTP-KQCQPSDTVCASVRITDPSSSR 85
Query: 61 V---ISKGCSLNCVDDSQ----DYYVG-------KKNITCCDTDLCNASGAHALQPAAAI 106
++K C+ +C + DY +G K ++ CC+ DLCN + P A
Sbjct: 86 KDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALA 145
Query: 107 LALLPALG-LLLW-GP 120
LL +LG LLW GP
Sbjct: 146 GGLLLSLGPALLWAGP 161
>gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]
Length = 141
Score = 43.5 bits (101), Expect = 4e-05
Identities = 43/131 (32%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 6 LALLMAGLALQPGTALL--CYSCKAQVSNEDCLQVE---NCT-QLGEQCWTARI-RAVGL 58
+A GL L PG AL CY C+ N DC E NCT + + C + ++ G+
Sbjct: 6 IAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGI 65
Query: 59 LTVISKGCSLNCVDDSQDYYV----GKKN---ITCCDTDLCN-------ASGAHALQPAA 104
+ S S C+ S Y GK N I+CC+T LCN S A AL+P
Sbjct: 66 MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 125
Query: 105 AILALLPALGL 115
L L L
Sbjct: 126 RTTILFLKLAL 136
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 43.1 bits (100), Expect = 5e-05
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M+ +L+ LL+A + AL C+ C +E C + C + C R + G +
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSPGGIL 57
Query: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHAL 100
V+ K CS C + + +++CC CN S A L
Sbjct: 58 VM-KSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 43.1 bits (100), Expect = 5e-05
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M+ +L+ LL+A + AL C+ C +E C + C + C R + G +
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSPGGIL 57
Query: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHAL 100
V+ K CS C + + +++CC CN S A L
Sbjct: 58 VM-KSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 43.1 bits (100), Expect = 5e-05
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M+ +L+ LL+A + AL C+ C +E C + C + C R + G +
Sbjct: 1 MRLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSPGGIL 57
Query: 61 VISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHAL 100
V+ K CS C + + +++CC CN S A L
Sbjct: 58 VM-KSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 40.0 bits (92), Expect = 4e-04
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 17 PGTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDS 74
PGT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 40 PGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMN 99
Query: 75 QDYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 100 LFSHGTRMQIICCRNQSFCN 119
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLT 60
M+ LL L +A P L C+ C S+ +C C C T
Sbjct: 1 MRTALLLLAALAVATGPALTLRCHVC---TSSSNCKHSVVCPASSRFCKTTNTVEPLRGN 57
Query: 61 VISKGCSLNCVDD---SQDYYVGKKNITCCDTDLCNASGAHALQPAAAILALLPALGLLL 117
++ K C+ +C G + CC DLCN +A A+ +LGL L
Sbjct: 58 LVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSLGLAL 117
>gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens]
Length = 124
Score = 37.7 bits (86), Expect = 0.002
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 4 VLLALLMAGLALQPGTALL--CYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTV 61
VL LL+ +AL PGT + C C+ S + +C E C+T A G V
Sbjct: 2 VLCWLLLLVMALPPGTTGVKDCVFCELTDSMQCPGTYMHCGD-DEDCFTGHGVAPGTGPV 60
Query: 62 ISKGC--SLNCVDDSQDYYVG---KKNITCCDTDLCNASGAHALQPAAAILALLPALGLL 116
I+KGC + +C + Y G CC LCN A + Q A +L LG+L
Sbjct: 61 INKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNR--APSSQTVGATTSLALGLGML 118
Query: 117 L 117
L
Sbjct: 119 L 119
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 130 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 189
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 190 FSHGTRMQIICCRNQSFCN 208
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 96 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 155
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 156 FSHGTRMQIICCRNQSFCN 174
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 185 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 244
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 245 FSHGTRMQIICCRNQSFCN 263
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 90 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 149
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 150 FSHGTRMQIICCRNQSFCN 168
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 115 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 174
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 175 FSHGTRMQIICCRNQSFCN 193
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 37.4 bits (85), Expect = 0.003
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 166 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 225
Query: 76 DYYVGKKNITCC-DTDLCN 93
+ + I CC + CN
Sbjct: 226 FSHGTRMQIICCRNQSFCN 244
>gi|13376874 lymphocyte antigen 6 complex G6C [Homo sapiens]
Length = 125
Score = 37.0 bits (84), Expect = 0.004
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 1 MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCT-QLGEQCWTARIRAVGLL 59
MKA++L L ++ L + C+SC +V C+ ++C + G+QC T +G +
Sbjct: 1 MKALML-LTLSVLLCWVSADIRCHSCY-KVPVLGCVDRQSCRLEPGQQCLTTHAY-LGKM 57
Query: 60 TVISKGCSLNC---VDDSQDYY--VGKK-----NITCCDTDLCNASGAHALQPAAAILAL 109
V S +L C + Q+ + +K N TCC+ D CN++G PA ++ L
Sbjct: 58 WVFS---NLRCGTPEEPCQEAFNQTNRKLGLTYNTTCCNKDNCNSAGPRP-TPALGLVFL 113
Query: 110 LPALGLLLW 118
GL LW
Sbjct: 114 TSLAGLGLW 122
>gi|161333839 activin A receptor, type IC isoform 4 [Homo sapiens]
Length = 336
Score = 34.7 bits (78), Expect = 0.019
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 6 LALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTVISKG 65
L LL A L PG +C C + SN C Q CW + + G VI
Sbjct: 13 LLLLAAAAELSPGLKCVCLLCDS--SNFTC-------QTEGACWASVMLTNGKEQVIKSC 63
Query: 66 CSLNCVDDSQDYYVGKKNIT---CCDTDLCNASGAH 98
SL ++ +Q + N+T CC TD CN H
Sbjct: 64 VSLPELN-AQVFCHSSNNVTKTECCFTDFCNNITLH 98
>gi|161333837 activin A receptor, type IC isoform 3 [Homo sapiens]
Length = 413
Score = 34.7 bits (78), Expect = 0.019
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 6 LALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTVISKG 65
L LL A L PG +C C + SN C Q CW + + G VI
Sbjct: 13 LLLLAAAAELSPGLKCVCLLCDS--SNFTC-------QTEGACWASVMLTNGKEQVIKSC 63
Query: 66 CSLNCVDDSQDYYVGKKNIT---CCDTDLCNASGAH 98
SL ++ +Q + N+T CC TD CN H
Sbjct: 64 VSLPELN-AQVFCHSSNNVTKTECCFTDFCNNITLH 98
>gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens]
Length = 493
Score = 34.7 bits (78), Expect = 0.019
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Query: 6 LALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLLTVISKG 65
L LL A L PG +C C + SN C Q CW + + G VI
Sbjct: 13 LLLLAAAAELSPGLKCVCLLCDS--SNFTC-------QTEGACWASVMLTNGKEQVIKSC 63
Query: 66 CSLNCVDDSQDYYVGKKNIT---CCDTDLCNASGAH 98
SL ++ +Q + N+T CC TD CN H
Sbjct: 64 VSLPELN-AQVFCHSSNNVTKTECCFTDFCNNITLH 98
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 34.7 bits (78), Expect = 0.019
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 5 LLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGL---LTV 61
LL + L L A+ C+ C C C + C T R + L +
Sbjct: 7 LLLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPL 63
Query: 62 ISKGCSLNCVDDSQDYYVGKKNITCCDTDLCN 93
++K C + C D +I CC T LCN
Sbjct: 64 VTKMCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,805,159
Number of Sequences: 37866
Number of extensions: 188689
Number of successful extensions: 560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 519
Number of HSP's gapped (non-prelim): 69
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.