LYPD1 1915

Name: LYPD1	Sequence: fasta or formatted (141aa)		NCBI GI: 116812612
Description: LY6/PLAUR domain containing 1 isoform a		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [89aa] LY6/PLAUR domain containing 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 13 2 C cysteine 9.9 14 2 D aspartate 1.4 2 1 E glutamate 3.5 5 2 F phenylalanine 5.7 8 1 G glycine 6.4 9 1 H histidine 0.7 1 1 I isoleucine 5.0 7 1 K lysine 4.3 6 2 L leucine 10.6 15 2 M methionine 2.8 4 1 N asparagine 5.0 7 2 P proline 5.0 7 1 Q glutamine 5.7 8 1 R arginine 3.5 5 1 S serine 10.6 15 2 T threonine 3.5 5 2 V valine 4.3 6 1 W tryptophan 0.7 1 1 Y tyrosine 2.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LY6/PLAUR domain containing 1 isoform a LYPD1 0.592 LY6/PLAUR domain containing 1 isoform b PSCA 0.070 prostate stem cell antigen preproprotein LYPD2 0.048 LY6/PLAUR domain containing 2 PLAUR 0.048 plasminogen activator, urokinase receptor isoform 3 ... PLAUR 0.048 plasminogen activator, urokinase receptor isoform 1 p... LYPD6 0.044 LY6/PLAUR domain containing 6 KRTAP1-5 0.033 keratin associated protein 1.5 CRB2 0.029 crumbs homolog 2 LOC100293868 0.026 PREDICTED: hypothetical protein LOC100288795 0.026 PREDICTED: hypothetical protein XP_002343543 NOTCH4 0.026 notch4 preproprotein GML 0.026 glycosylphosphatidylinositol anchored molecule like p... KRTAP1-3 0.026 keratin associated protein 1-3 ZNFX1 0.026 zinc finger, NFX1-type containing 1 DLL4 0.026 delta-like 4 protein precursor CRB1 0.026 crumbs homolog 1 precursor LYPD6B 0.026 LY6/PLAUR domain containing 6B KRTAP1-1 0.026 keratin associated protein 1-1 NOTCH1 0.018 notch1 preproprotein NOTCH3 0.018 Notch homolog 3 KRTAP10-4 0.018 keratin associated protein 10-4 KRTAP10-9 0.018 keratin associated protein 10-9 KRTAP10-7 0.018 keratin associated protein 10-7 DLK2 0.018 EGF-like-domain, multiple 9 DLK2 0.018 EGF-like-domain, multiple 9 JAG1 0.015 jagged 1 precursor NGB 0.015 neuroglobin SHF 0.015 Src homology 2 domain containing F SMG1 0.011 PI-3-kinase-related kinase SMG-1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.