Guide to the Human Genome
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Name: ACVR1C Sequence: fasta or formatted (493aa) NCBI GI: 161333833
Description:

activin A receptor, type IC isoform 1

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [443aa] activin A receptor, type IC isoform 2
alt prot [413aa] activin A receptor, type IC isoform 3
alt prot [336aa] activin A receptor, type IC isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         41           4
 C cysteine            4.9         24           2
 D aspartate           4.1         20           2
 E glutamate           6.1         30           2
 F phenylalanine       2.2         11           1
 G glycine             5.7         28           2
 H histidine           1.8          9           1
 I isoleucine          6.9         34           3
 K lysine              5.9         29           3
 L leucine             9.9         49           4
 M methionine          2.8         14           1
 N asparagine          4.7         23           2
 P proline             3.9         19           1
 Q glutamine           3.7         18           1
 R arginine            5.3         26           2
 S serine              6.7         33           2
 T threonine           5.3         26           1
 V valine              7.3         36           2
 W tryptophan          2.0         10           1
 Y tyrosine            2.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activin A receptor, type IC isoform 1 
ACVR1C                0.897   activin A receptor, type IC isoform 2 
TGFBR1                0.646   transforming growth factor, beta receptor I isoform 1...
ACVR1B                0.632   activin A receptor, type IB isoform a precursor [Homo...
ACVR1C                0.626   activin A receptor, type IC isoform 3 
ACVR1B                0.563   activin A receptor, type IB isoform b precursor [Hom...
TGFBR1                0.522   transforming growth factor, beta receptor I isoform...
ACVR1B                0.483   activin A receptor, type IB isoform c precursor [Hom...
ACVR1C                0.466   activin A receptor, type IC isoform 4 
BMPR1A                0.442   bone morphogenetic protein receptor, type IA precurs...
BMPR1B                0.440   bone morphogenetic protein receptor, type IB precurso...
ACVR1                 0.435   activin A receptor, type I precursor 
ACVR1                 0.435   activin A receptor, type I precursor 
ACVRL1                0.400   activin A receptor type II-like 1 
ACVRL1                0.400   activin A receptor type II-like 1 
ACVR2A                0.217   activin A receptor, type IIA precursor 
ACVR2B                0.216   activin A receptor, type IIB precursor 
TGFBR2                0.206   transforming growth factor, beta receptor II isoform...
TGFBR2                0.206   transforming growth factor, beta receptor II isoform...
BMPR2                 0.175   bone morphogenetic protein receptor type II precurso...
AMHR2                 0.148   anti-Mullerian hormone receptor, type II 
CSK                   0.065   c-src tyrosine kinase 
CSK                   0.065   c-src tyrosine kinase 
ZAK                   0.058   MLK-related kinase isoform 2 
ZAK                   0.058   MLK-related kinase isoform 1 
RAF1                  0.057   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.056   mitogen-activated protein kinase kinase kinase 7 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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