Guide to the Human Genome
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Name: LY6H Sequence: fasta or formatted (140aa) NCBI GI: 208431838
Description:

lymphocyte antigen 6 complex, locus H isoform a

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [161aa] lymphocyte antigen 6 complex, locus H isoform b
alt prot [161aa] lymphocyte antigen 6 complex, locus H isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         15           2
 C cysteine            7.9         11           2
 D aspartate           6.4          9           1
 E glutamate           0.7          1           1
 F phenylalanine       2.9          4           2
 G glycine             8.6         12           2
 H histidine           3.6          5           1
 I isoleucine          2.1          3           1
 K lysine              5.0          7           1
 L leucine            13.6         19           3
 M methionine          2.9          4           1
 N asparagine          2.9          4           1
 P proline             5.7          8           1
 Q glutamine           2.1          3           1
 R arginine            2.1          3           1
 S serine             10.7         15           3
 T threonine           4.3          6           2
 V valine              5.0          7           1
 W tryptophan          2.1          3           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 6 complex, locus H isoform a [Ho... 
LY6H                  1.000   lymphocyte antigen 6 complex, locus H isoform b [Ho...
LY6H                  1.000   lymphocyte antigen 6 complex, locus H isoform b [Ho...
LY6E                  0.120   lymphocyte antigen 6 complex, locus E 
LY6E                  0.120   lymphocyte antigen 6 complex, locus E 
LOC100292543          0.080   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.080   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.080   PREDICTED: hypothetical protein XP_002342921 
LY6D                  0.080   lymphocyte antigen 6 complex, locus D 
PSCA                  0.069   prostate stem cell antigen preproprotein 
LYNX1                 0.066   secreted Ly6/uPAR related protein 2 isoform b 
LYPD2                 0.055   LY6/PLAUR domain containing 2 
LYNX1                 0.040   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.040   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.040   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.040   Ly-6 neurotoxin-like protein 1 isoform a 
SLURP1                0.033   ARS component B precursor 
NOTCH2                0.018   notch 2 preproprotein 
LRP1                  0.018   low density lipoprotein-related protein 1 
LOC100291118          0.018   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.018   PREDICTED: hypothetical protein XP_002343203 
LRP2                  0.018   low density lipoprotein-related protein 2 
AGRN                  0.018   agrin 
ADNP                  0.018   activity-dependent neuroprotector 
ADNP                  0.018   activity-dependent neuroprotector 
SPRY2                 0.018   sprouty 2 
BAMBI                 0.015   BMP and activin membrane-bound inhibitor precursor [H...
DHX32                 0.011   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
GPIHBP1               0.011   glycosylphosphatidylinositol anchored high density l...
KRTAP10-6             0.011   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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