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Search of human proteins with 4506803
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506803 stem cell growth factor precursor [Homo sapiens]
(323 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506803 stem cell growth factor precursor [Homo sapiens] 674 0.0
gi|148728186 C-type lectin domain family 3 member A [Homo sapiens] 86 3e-17
gi|156627579 C-type lectin domain family 3, member B [Homo sapiens] 83 4e-16
gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens] 60 3e-09
gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens] 60 3e-09
gi|61699226 pulmonary surfactant-associated protein D precursor ... 52 9e-07
gi|110624774 mannose receptor, C type 2 [Homo sapiens] 49 6e-06
gi|5453619 collectin sub-family member 10 [Homo sapiens] 49 6e-06
gi|148886696 surfactant protein A2 [Homo sapiens] 48 1e-05
gi|38888175 surfactant, pulmonary-associated protein A1B [Homo s... 48 1e-05
gi|146149162 surfactant, pulmonary-associated protein A2 [Homo s... 48 1e-05
gi|227497624 secretory protein LOC348174 [Homo sapiens] 47 3e-05
gi|209977023 secretory protein LOC348174 [Homo sapiens] 47 3e-05
gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens] 46 5e-05
gi|58866695 mannose receptor-like [Homo sapiens] 45 1e-04
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens] 44 1e-04
gi|194018451 C-type lectin domain family 18, member B [Homo sapi... 44 3e-04
gi|147903070 surfactant protein A1 [Homo sapiens] 43 3e-04
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens] 43 4e-04
gi|38372935 brevican isoform 1 [Homo sapiens] 42 6e-04
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens] 42 6e-04
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 42 7e-04
gi|55741655 anoctamin 8 [Homo sapiens] 42 0.001
gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Hom... 42 0.001
gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Hom... 42 0.001
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 42 0.001
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens] 42 0.001
gi|144446030 lymphocyte antigen 75 [Homo sapiens] 40 0.003
gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor ... 39 0.005
gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor... 39 0.005
>gi|4506803 stem cell growth factor precursor [Homo sapiens]
Length = 323
Score = 674 bits (1739), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MQAAWLLGALVVPQLLGFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAG 60
MQAAWLLGALVVPQLLGFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAG
Sbjct: 1 MQAAWLLGALVVPQLLGFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAG 60
Query: 61 RGDENPAGTVEGKEDWEMEEDQGEEEEEEATPTPSSGPSPSPTPEDIVTYILGRLAGLDA 120
RGDENPAGTVEGKEDWEMEEDQGEEEEEEATPTPSSGPSPSPTPEDIVTYILGRLAGLDA
Sbjct: 61 RGDENPAGTVEGKEDWEMEEDQGEEEEEEATPTPSSGPSPSPTPEDIVTYILGRLAGLDA 120
Query: 121 GLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEGCLKG 180
GLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEGCLKG
Sbjct: 121 GLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEGCLKG 180
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL
Sbjct: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA
Sbjct: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
Query: 301 SDDGSWWDHDCQRRLYYVCEFPF 323
SDDGSWWDHDCQRRLYYVCEFPF
Sbjct: 301 SDDGSWWDHDCQRRLYYVCEFPF 323
>gi|148728186 C-type lectin domain family 3 member A [Homo sapiens]
Length = 197
Score = 86.3 bits (212), Expect = 3e-17
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 144 RQLRNAAGDTRDAVQALQEAQGRAEREHGRLEGCLKGLRLGHKCFLLSRDFEAQAAAQAR 203
R++R+ GD + ++ L + CL+G ++ KC+L S + A
Sbjct: 35 RRVRDKDGDLKTQIEKLWTEVNALKEIQALQTVCLRGTKVHKKCYLASEGLKHFHEANED 94
Query: 204 CTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFA 263
C ++GG L P + ++ AL Y + +L N WLG++D EG ++ NG +SF
Sbjct: 95 CISKGGILVIPRNSDEINALQDYGKRSLPGVN-DFWLGINDMVTEGKFVDVNGIAISFLN 153
Query: 264 WHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVA-QASDDGSWWDHDCQRRLYYVCEF 321
W R+ QPNGG ENCV S G W D C+ Y+CEF
Sbjct: 154 WDRA-------------------QPNGGKRENCVLFSQSAQGKWSDEACRSSKRYICEF 193
>gi|156627579 C-type lectin domain family 3, member B [Homo sapiens]
Length = 202
Score = 82.8 bits (203), Expect = 4e-16
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 18/146 (12%)
Query: 177 CLKGLRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNW 236
CLKG ++ KCFL + A C +RGG+L P + +AL YLR ++
Sbjct: 71 CLKGTKVHMKCFLAFTQTKTFHEASEDCISRGGTLGTPQTGSENDALYEYLRQSVG-NEA 129
Query: 237 PVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENC 296
+WLG++D AEG ++ G R+++ W E+ A QP+GG ENC
Sbjct: 130 EIWLGLNDMAAEGTWVDMTGARIAYKNW----ETEITA------------QPDGGKTENC 173
Query: 297 -VAQASDDGSWWDHDCQRRLYYVCEF 321
V + +G W+D C+ +L Y+C+F
Sbjct: 174 AVLSGAANGKWFDKRCRDQLPYICQF 199
>gi|40548420 collectin sub-family member 11 isoform b [Homo sapiens]
Length = 268
Score = 60.1 bits (144), Expect = 3e-09
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 117 GLDAGLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEG 176
GL QL + +D +V +LT L+ ++NA R+
Sbjct: 107 GLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETES------------------ 148
Query: 177 CLKGLRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYL-RAALAPYN 235
K +LL ++ + A AQ C RGG+L+ P D + YL +A LA
Sbjct: 149 ---------KIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLA--- 196
Query: 236 WPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLEN 295
V++G++D EG +++ + + F RS P N E+
Sbjct: 197 -RVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPN-----------------NAYDEED 238
Query: 296 CVAQASDDGSWWDHDCQRRLYYVCEF 321
CV + G W D C +Y++CEF
Sbjct: 239 CVEMVA-SGGWNDVACHTTMYFMCEF 263
>gi|13128972 collectin sub-family member 11 isoform a [Homo sapiens]
Length = 271
Score = 60.1 bits (144), Expect = 3e-09
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 50/206 (24%)
Query: 117 GLDAGLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEG 176
GL QL + +D +V +LT L+ ++NA R+
Sbjct: 110 GLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETES------------------ 151
Query: 177 CLKGLRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYL-RAALAPYN 235
K +LL ++ + A AQ C RGG+L+ P D + YL +A LA
Sbjct: 152 ---------KIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLA--- 199
Query: 236 WPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLEN 295
V++G++D EG +++ + + F RS P N E+
Sbjct: 200 -RVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPN-----------------NAYDEED 241
Query: 296 CVAQASDDGSWWDHDCQRRLYYVCEF 321
CV + G W D C +Y++CEF
Sbjct: 242 CVEMVA-SGGWNDVACHTTMYFMCEF 266
>gi|61699226 pulmonary surfactant-associated protein D precursor
[Homo sapiens]
Length = 375
Score = 51.6 bits (122), Expect = 9e-07
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 28/172 (16%)
Query: 154 RDAVQALQ---EAQGRAEREHGRLEGCLKGLRLGHKCFLLSRDFEAQAAAQARCTARGGS 210
R V+ALQ + A ++ ++E G +G K F + + AQ CT GG
Sbjct: 228 RQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTEAQLLCTQAGGQ 287
Query: 211 LAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRP 270
LA P + AL + + A N +L + D + EG + + G+ + + W
Sbjct: 288 LASPRSAAENAALQQLVVAK----NEAAFLSMTDSKTEGKFTYPTGESLVYSNW------ 337
Query: 271 ELGAQPSASPHPLSPDQPN-GGTLENCVAQASDDGSWWDHDCQRRLYYVCEF 321
+P +PN G E+CV + +G W D C + VCEF
Sbjct: 338 -------------APGEPNDDGGSEDCV-EIFTNGKWNDRACGEKRLVVCEF 375
>gi|110624774 mannose receptor, C type 2 [Homo sapiens]
Length = 1479
Score = 48.9 bits (115), Expect = 6e-06
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 26/139 (18%)
Query: 184 GHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVH 243
GH C+ L + + ++ C GG L ++E +T+ ++ + +W+G++
Sbjct: 391 GH-CYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQEVEE----LWIGLN 445
Query: 244 DRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNG--GTLENCVAQAS 301
D + + + + +G VSF WH P +PN +LE+CV
Sbjct: 446 DLKLQMNFEWSDGSLVSFTHWH-------------------PFEPNNFRDSLEDCVTIWG 486
Query: 302 DDGSWWDHDCQRRLYYVCE 320
+G W D C + L +C+
Sbjct: 487 PEGRWNDSPCNQSLPSICK 505
Score = 45.1 bits (105), Expect = 9e-05
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 37/169 (21%)
Query: 158 QALQEAQGRAEREHGRLEGCLKGLRL-GHKCFLLSRDFEAQAAAQARCTARGGSLAQPAD 216
+A Q +QG AE +HG C KG C+ L D + A+ CT G L +
Sbjct: 506 KAGQLSQGAAEEDHG----CRKGWTWHSPSCYWLGEDQVTYSEARRLCTDHGSQLVTITN 561
Query: 217 RQQMEALTRYLRAALAPYNWP---VWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELG 273
R + ++ + YNW W + D + G + + +G V + W+R
Sbjct: 562 RFEQAFVSSLI------YNWEGEYFWTALQDLNSTGSFFWLSGDEVMYTHWNR------- 608
Query: 274 AQPSASPHPLSPDQPNGGTLENCVAQASDD--GSWWDHDCQR-RLYYVC 319
DQP G + CVA A+ G W +C R Y+C
Sbjct: 609 ------------DQP-GYSRGGCVALATGSAMGLWEVKNCTSFRARYIC 644
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 24/122 (19%)
Query: 200 AQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRV 259
A A C +G L + + Y+ L Y+ +W+G++D G + + + +
Sbjct: 262 AWASCEQQGADLLSITEIHEQT----YINGLLTGYSSTLWIGLNDLDTSGGWQWSDNSPL 317
Query: 260 SFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENC-VAQASDDGSWWDHDCQRRLYYV 318
+ W DQP+ + ENC V + G W + DC L YV
Sbjct: 318 KYLNWES-------------------DQPDNPSEENCGVIRTESSGGWQNRDCSIALPYV 358
Query: 319 CE 320
C+
Sbjct: 359 CK 360
Score = 42.0 bits (97), Expect = 7e-04
Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 18/123 (14%)
Query: 198 AAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQ 257
A AQ CT L + +++ L+ L+ W+G+H ++G + + +G
Sbjct: 847 AQAQRICTWFQAELTSVHSQAELDFLSHNLQKFSRAQEQHWWIGLHTSESDGRFRWTDGS 906
Query: 258 RVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRLYY 317
++F +W P P+ D + CV + W D C L Y
Sbjct: 907 IINFISW-----------APGKPRPVGKD-------KKCVYMTASREDWGDQRCLTALPY 948
Query: 318 VCE 320
+C+
Sbjct: 949 ICK 951
Score = 29.3 bits (64), Expect = 4.9
Identities = 24/112 (21%), Positives = 38/112 (33%), Gaps = 26/112 (23%)
Query: 204 CTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFA 263
C +R SLA D LT+ R P +W+G+ Y + + + +++
Sbjct: 1153 CESRNASLAYVPDPYTQAFLTQAARGLRTP----LWIGLAGEEGSRRYSWVSEEPLNYVG 1208
Query: 264 WHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRL 315
W P QP G T + DG+W C +L
Sbjct: 1209 WQDG----------------EPQQPGGCTYVDV------DGAWRTTSCDTKL 1238
>gi|5453619 collectin sub-family member 10 [Homo sapiens]
Length = 277
Score = 48.9 bits (115), Expect = 6e-06
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 24/173 (13%)
Query: 151 GDTRDAVQALQEAQGRAEREHGRLEGCLKGLR-LGHKCFLLSRDFEAQAAAQARCTARGG 209
G R V L + R + ++ + G+R K + + ++ + + C RGG
Sbjct: 122 GRYRKFVGQLDISIARLKTSMKFVKNVIAGIRETEEKFYYIVQEEKNYRESLTHCRIRGG 181
Query: 210 SLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLF-ENGQRVSFFAWHRSP 268
LA P D + Y+ + + V++GV+D EG Y+F +N ++ W+
Sbjct: 182 MLAMPKDEAANTLIADYVAKSGF---FRVFIGVNDLEREGQYMFTDNTPLQNYSNWNEG- 237
Query: 269 RPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRLYYVCEF 321
P P G E+CV S G W D +C +Y+VCEF
Sbjct: 238 ---------------EPSDPYGH--EDCVEMLSS-GRWNDTECHLTMYFVCEF 272
>gi|148886696 surfactant protein A2 [Homo sapiens]
Length = 248
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
+ +G K F + A Q C GG +A P + ++ EA+ +++ YN ++
Sbjct: 132 MTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVK----KYNTYAYV 187
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
G+ + + G + + +G V++ W+R +P G E CV +
Sbjct: 188 GLTEGPSPGDFRYSDGTPVNYTNWYRG-------------------EPAGRGKEQCV-EM 227
Query: 301 SDDGSWWDHDCQRRLYYVCEF 321
DG W D +C +CEF
Sbjct: 228 YTDGQWNDRNCLYSRLTICEF 248
>gi|38888175 surfactant, pulmonary-associated protein A1B [Homo
sapiens]
Length = 248
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
+ +G K F + A Q C GG +A P + ++ EA+ +++ YN ++
Sbjct: 132 MTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVK----KYNTYAYV 187
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
G+ + + G + + +G V++ W+R +P G E CV +
Sbjct: 188 GLTEGPSPGDFRYSDGTPVNYTNWYRG-------------------EPAGRGKEQCV-EM 227
Query: 301 SDDGSWWDHDCQRRLYYVCEF 321
DG W D +C +CEF
Sbjct: 228 YTDGQWNDRNCLYSRLTICEF 248
>gi|146149162 surfactant, pulmonary-associated protein A2 [Homo
sapiens]
Length = 248
Score = 48.1 bits (113), Expect = 1e-05
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
+ +G K F + A Q C GG +A P + ++ EA+ +++ YN ++
Sbjct: 132 MTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVK----KYNTYAYV 187
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
G+ + + G + + +G V++ W+R +P G E CV +
Sbjct: 188 GLTEGPSPGDFRYSDGTPVNYTNWYRG-------------------EPAGRGKEQCV-EM 227
Query: 301 SDDGSWWDHDCQRRLYYVCEF 321
DG W D +C +CEF
Sbjct: 228 YTDGQWNDRNCLYSRLTICEF 248
>gi|227497624 secretory protein LOC348174 [Homo sapiens]
Length = 446
Score = 46.6 bits (109), Expect = 3e-05
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 30/151 (19%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPV-- 238
LR+ CF++S + + A+ +C +GG LAQ ++ + L YL L N +
Sbjct: 304 LRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYL-GRLETTNEVIDS 362
Query: 239 -------WLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGG 291
W+G+ + A+ + + G+ +F ++ + QP+
Sbjct: 363 DFETRNFWIGLTYKTAKDSFRWATGEHQAFTSF-------------------AFGQPDNH 403
Query: 292 TLENCV-AQASDDGSWWDHDCQRRLYYVCEF 321
NCV QAS +W D C+ R Y+C+F
Sbjct: 404 GFGNCVELQASAAFNWNDQRCKTRNRYICQF 434
>gi|209977023 secretory protein LOC348174 [Homo sapiens]
Length = 446
Score = 46.6 bits (109), Expect = 3e-05
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 30/151 (19%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPV-- 238
LR+ CF++S + + A+ +C +GG LAQ ++ + L YL L N +
Sbjct: 304 LRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYL-GRLETTNEVIDS 362
Query: 239 -------WLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGG 291
W+G+ + A+ + + G+ +F ++ + QP+
Sbjct: 363 DFETRNFWIGLTYKTAKDSFRWATGEHQAFTSF-------------------AFGQPDNH 403
Query: 292 TLENCV-AQASDDGSWWDHDCQRRLYYVCEF 321
NCV QAS +W D C+ R Y+C+F
Sbjct: 404 GFGNCVELQASAAFNWNDQRCKTRNRYICQF 434
>gi|4557739 soluble mannose-binding lectin precursor [Homo sapiens]
Length = 248
Score = 45.8 bits (107), Expect = 5e-05
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 151 GDTRDAVQALQEAQGRA-EREHGRLEGCLK---GLRLGHKCFLLSRDFEAQAAAQARCTA 206
G + D +L ++ +A + E R++ L G ++G+K FL + + +A C
Sbjct: 98 GKSPDGDSSLAASERKALQTEMARIKKWLTFSLGKQVGNKFFLTNGEIMTFEKVKALCVK 157
Query: 207 RGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHR 266
S+A P + + A+ ++ +LG+ D + EG ++ G R+++ W+
Sbjct: 158 FQASVATPRNAAENGAIQNLIKEE-------AFLGITDEKTEGQFVDLTGNRLTYTNWNE 210
Query: 267 SPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRLYYVCEFP 322
+ N G+ E+CV +G W D C VCEFP
Sbjct: 211 G------------------EPNNAGSDEDCVLLLK-NGQWNDVPCSTSHLAVCEFP 247
>gi|58866695 mannose receptor-like [Homo sapiens]
Length = 446
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 30/151 (19%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPV-- 238
LR+ CF++S + + A+ +C +GG LAQ ++ + L YL L N +
Sbjct: 304 LRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYL-GRLETTNEVIDS 362
Query: 239 -------WLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGG 291
W+G+ + A+ + + G+ +F ++ + QP+
Sbjct: 363 DFETRNFWIGLTYKTAKDSFRWATGEHQAFTSF-------------------AFGQPDNH 403
Query: 292 TLENCV-AQASDDGSWWDHDCQRRLYYVCEF 321
NCV QAS +W + C+ R Y+C+F
Sbjct: 404 GFGNCVELQASAAFNWNNQRCKTRNRYICQF 434
>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
Length = 1456
Score = 44.3 bits (103), Expect = 1e-04
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 184 GHKCFLLSRDFEA-QAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGV 242
GH C+ + RD + Q A C GG L ++++ + L P N +W+G+
Sbjct: 371 GH-CYKIHRDEKKIQRDALTTCRKEGGDLTSIHTIEELDFIISQL--GYEP-NDELWIGL 426
Query: 243 HDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASD 302
+D + + + + +G V+F W R P N E+CV
Sbjct: 427 NDIKIQMYFEWSDGTPVTFTKWLRG----------------EPSHENNRQ-EDCVVMKGK 469
Query: 303 DGSWWDHDCQRRLYYVCE 320
DG W D C+ L Y+C+
Sbjct: 470 DGYWADRGCEWPLGYICK 487
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 176 GCLKGLRL-GHKCFLLSRDFEAQAA----AQARCTARGGSLAQPADRQQMEALTRYLRAA 230
GC +G +KCF + E + A+ C GG+L + ++ LT +++ +
Sbjct: 944 GCKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDS 1003
Query: 231 LAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNG 290
+ W G++D +E +L+ +G+ V + W + P LS +
Sbjct: 1004 ----TFSAWTGLNDVNSEHTFLWTDGRGVHYTNWGK-------GYPGGRRSSLSYED--- 1049
Query: 291 GTLENCV----AQASDDGSWWDHDCQRRLYYVCE 320
+CV +++ G W D C + Y+C+
Sbjct: 1050 ---ADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
Score = 37.4 bits (85), Expect = 0.018
Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 175 EGCLKGLRLGH-KCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAP 233
+GC KG + H C+++ A A C L DR + LT ++ L P
Sbjct: 502 KGCRKGWKKHHFYCYMIGHTLSTFAEANQTCNNENAYLTTIEDRYEQAFLTSFV--GLRP 559
Query: 234 YNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTL 293
+ W G+ D + +G + + + V F W + D P G
Sbjct: 560 EKY-FWTGLSDIQTKGTFQWTIEEEVRFTHW-------------------NSDMP--GRK 597
Query: 294 ENCVAQASD-DGSWWD-HDCQRRLYYVCE 320
CVA + G WD C + +VC+
Sbjct: 598 PGCVAMRTGIAGGLWDVLKCDEKAKFVCK 626
Score = 36.6 bits (83), Expect = 0.031
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 184 GHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVH 243
GH ++ S A C G SL + L+ + + N+ W+G+
Sbjct: 1243 GHCYYIESSYTRNWGQASLECLRMGSSLVSIESAAESSFLSYRVEPLKSKTNF--WIGLF 1300
Query: 244 DRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDD 303
R EG +L+ N VSF W+ PS G +CVA +
Sbjct: 1301 -RNVEGTWLWINNSPVSFVNWNTG-------DPS-------------GERNDCVALHASS 1339
Query: 304 GSWWDHDCQRRLYYVCEFP 322
G W + C Y+C+ P
Sbjct: 1340 GFWSNIHCSSYKGYICKRP 1358
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 186 KCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGV-HD 244
K + SRDF C A GG LA ++++ + + R + A+ Y+ WLG+ +
Sbjct: 671 KTWFESRDF---------CRALGGDLASINNKEEQQTIWRLITAS-GSYHKLFWLGLTYG 720
Query: 245 RRAEGLYLFENGQRVSFFAW 264
+EG + + +G VS+ W
Sbjct: 721 SPSEG-FTWSDGSPVSYENW 739
Score = 30.0 bits (66), Expect = 2.9
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 21/133 (15%)
Query: 188 FLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRA 247
+ S++ E A+A C G L + + L +Y+ A + + L +
Sbjct: 812 YYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLLIS---L 868
Query: 248 EGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWW 307
+ + + +G +V + +W + P+ + D ENCV S+ G W
Sbjct: 869 DKKFAWMDGSKVDYVSW-----------ATGEPNFANED-------ENCVTMYSNSGFWN 910
Query: 308 DHDCQRRLYYVCE 320
D +C ++C+
Sbjct: 911 DINCGYPNAFICQ 923
>gi|194018451 C-type lectin domain family 18, member B [Homo
sapiens]
Length = 455
Score = 43.5 bits (101), Expect = 3e-04
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPV-- 238
LR+ CF++S + + A+ +C +GG LAQ ++ + L YL L N +
Sbjct: 304 LRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYL-GRLETTNEVIDS 362
Query: 239 -------WLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGG 291
W+G+ + A+ + + G+ +F ++ G + LS G
Sbjct: 363 DFETRNFWIGLTYKTAKDSFRWATGEHQAFTSF------AFGQPDNHGLVWLSAAMGFG- 415
Query: 292 TLENCV-AQASDDGSWWDHDCQRRLYYVCEF 321
NCV QAS +W D C+ R Y+C+F
Sbjct: 416 ---NCVELQASAAFNWNDQRCKTRNRYICQF 443
>gi|147903070 surfactant protein A1 [Homo sapiens]
Length = 245
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 24/131 (18%)
Query: 181 LRLGHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
+ +G K F + A Q C GG +A P + ++ EA+ +++ YN ++
Sbjct: 132 MTVGEKVFSSNGQSITFDAIQEACARAGGRIAVPRNPEENEAIASFVK----KYNTYAYV 187
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQA 300
G+ + + G + + +G V++ W+R +P G E CV +
Sbjct: 188 GLTEGPSPGDFRYSDGTPVNYTNWYRG-------------------EPAGRGKEQCV-EM 227
Query: 301 SDDGSWWDHDC 311
DG W D +C
Sbjct: 228 YTDGQWNDRNC 238
>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
Length = 1456
Score = 42.7 bits (99), Expect = 4e-04
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 22/138 (15%)
Query: 184 GHKCFLLSRDFEA-QAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGV 242
GH C+ + RD + Q A C G LA ++ + + L P N +W+G+
Sbjct: 371 GH-CYKIHRDEKKIQRDALTTCRKEGSDLASIHTIEEFDFIISQL--GYEP-NDELWIGL 426
Query: 243 HDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASD 302
+D + + + + +G V+F W R P N E+CV
Sbjct: 427 NDIKIQMYFEWSDGTPVTFTKWLRG----------------EPSHENNRQ-EDCVVMKGK 469
Query: 303 DGSWWDHDCQRRLYYVCE 320
DG W D C+ L Y+C+
Sbjct: 470 DGYWADRGCEWPLGYICK 487
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 26/154 (16%)
Query: 176 GCLKGLRL-GHKCFLLSRDFEAQAA----AQARCTARGGSLAQPADRQQMEALTRYLRAA 230
GC +G +KCF + E + A+ C GG+L + ++ LT +++ +
Sbjct: 944 GCKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDS 1003
Query: 231 LAPYNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNG 290
+ W G++D +E +L+ +G+ V + W + P LS +
Sbjct: 1004 ----TFSAWTGLNDVNSEHTFLWTDGRGVHYTNWGK-------GYPGGRRSSLSYED--- 1049
Query: 291 GTLENCV----AQASDDGSWWDHDCQRRLYYVCE 320
+CV +++ G W D C + Y+C+
Sbjct: 1050 ---ADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
Score = 37.4 bits (85), Expect = 0.018
Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 175 EGCLKGLRLGH-KCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAP 233
+GC KG + H C+++ A A C L DR + LT ++ L P
Sbjct: 502 KGCRKGWKKHHFYCYMIGHTLSTFAEANQTCNNENAYLTTIEDRYEQAFLTSFV--GLRP 559
Query: 234 YNWPVWLGVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTL 293
+ W G+ D + +G + + + V F W + D P G
Sbjct: 560 EKY-FWTGLSDIQTKGTFQWTIEEEVRFTHW-------------------NSDMP--GRK 597
Query: 294 ENCVAQASD-DGSWWD-HDCQRRLYYVCE 320
CVA + G WD C + +VC+
Sbjct: 598 PGCVAMRTGIAGGLWDVLKCDEKAKFVCK 626
Score = 36.6 bits (83), Expect = 0.031
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 184 GHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVH 243
GH ++ S A C G SL + L+ + + N+ W+G+
Sbjct: 1243 GHCYYIESSYTRNWGQASLECLRMGSSLVSIESAAESSFLSYRVEPLKSKTNF--WIGLF 1300
Query: 244 DRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDD 303
R EG +L+ N VSF W+ PS G +CVA +
Sbjct: 1301 -RNVEGTWLWINNSPVSFVNWNTG-------DPS-------------GERNDCVALHASS 1339
Query: 304 GSWWDHDCQRRLYYVCEFP 322
G W + C Y+C+ P
Sbjct: 1340 GFWSNIHCSSYKGYICKRP 1358
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 186 KCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGV-HD 244
K + SRDF C A GG LA ++++ + + R + A+ Y+ WLG+ +
Sbjct: 671 KTWFESRDF---------CRALGGDLASINNKEEQQTIWRLITAS-GSYHKLFWLGLTYG 720
Query: 245 RRAEGLYLFENGQRVSFFAW 264
+EG + + +G VS+ W
Sbjct: 721 SPSEG-FTWSDGSPVSYENW 739
Score = 30.0 bits (66), Expect = 2.9
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 21/133 (15%)
Query: 188 FLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRA 247
+ S++ E A+A C G L + + L +Y+ A + + L +
Sbjct: 812 YYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLLIS---L 868
Query: 248 EGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWW 307
+ + + +G +V + +W + P+ + D ENCV S+ G W
Sbjct: 869 DKKFAWMDGSKVDYVSW-----------ATGEPNFANED-------ENCVTMYSNSGFWN 910
Query: 308 DHDCQRRLYYVCE 320
D +C ++C+
Sbjct: 911 DINCGYPNAFICQ 923
>gi|38372935 brevican isoform 1 [Homo sapiens]
Length = 911
Score = 42.4 bits (98), Expect = 6e-04
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 185 HKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHD 244
+K F R +E A+ +C G LA + ++ + + R W+G++D
Sbjct: 700 YKHFSTRRSWEE---AETQCRMYGAHLASISTPEEQDFINNRYREYQ-------WIGLND 749
Query: 245 RRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTL--ENCVAQA-S 301
R EG +L+ +G + + W +P QP+ L ENCV
Sbjct: 750 RTIEGDFLWSDGVPLLYENW-------------------NPGQPDSYFLSGENCVVMVWH 790
Query: 302 DDGSWWDHDCQRRLYYVCE 320
D G W D C L Y C+
Sbjct: 791 DQGQWSDVPCNYHLSYTCK 809
Score = 35.0 bits (79), Expect = 0.090
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 31 GGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEMEEDQGEEEEEE- 89
GG E+ E +L+ +++ P G +E +E +E +E EE++ EEEEEE
Sbjct: 415 GGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSEEE-GKALEEEEKYEDEEEKEEEEEEEE 473
Query: 90 -------ATPTPSSGPSP 100
A P+ S P P
Sbjct: 474 VEDEALWAWPSELSSPGP 491
>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
Length = 291
Score = 42.4 bits (98), Expect = 6e-04
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 26/137 (18%)
Query: 187 CFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRR 246
C+ SR +A A A C L ++ ++++ + P N W+G+HD+
Sbjct: 165 CYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQ----KFVQHHIGPVN--TWMGLHDQN 218
Query: 247 AEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTL---ENCVAQASDD 303
++ F W RPE PD G L E+C A +DD
Sbjct: 219 GPWKWVDGTDYETGFKNW----RPE------------QPDDWYGHGLGGGEDC-AHFTDD 261
Query: 304 GSWWDHDCQRRLYYVCE 320
G W D CQR +VCE
Sbjct: 262 GRWNDDVCQRPYRWVCE 278
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 42.0 bits (97), Expect = 7e-04
Identities = 69/323 (21%), Positives = 108/323 (33%), Gaps = 59/323 (18%)
Query: 30 EGGWGGAQEEEREREALMLKHLQEA--------LGLPAGRGDENPAGTVEGKEDWEMEED 81
E G+G + E RE L E L +G G T + E E
Sbjct: 1994 EAGFGASAAPEASREDSGSPDLSETTSAFHEANLERSSGLGVSGSTLTFQEGEASAAPEV 2053
Query: 82 QGEEEEEEATPTPSSG-PSPSPTPEDIVTYILGRLAGLDAGL------------------ 122
GE T + G PS +PT T I G L+G + L
Sbjct: 2054 SGESTTTSDVGTEAPGLPSATPTASGDRTEISGDLSGHTSQLGVVISTSIPESEWTQQTQ 2113
Query: 123 HQLHVRLHALDTRVVELTQGLRQLRNAAGDTRDAVQALQEAQGRAEREHGRLEGCLKGLR 182
L + ++ + + A T ++ A E + +E E C +G
Sbjct: 2114 RPAETHLEIESSSLLYSGEETHTVETATSPTDASIPASPEWKRESESTAADQEVCEEGWN 2173
Query: 183 L--GHKCFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWL 240
GH C+ D E A+ RC + L+ ++ E ++ Y W +
Sbjct: 2174 KYQGH-CYRHFPDRETWVDAERRCREQQSHLSSIVTPEEQE----FVNNNAQDYQW---I 2225
Query: 241 GVHDRRAEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNG--GTLENCVA 298
G++DR EG + + +G + F W P+QP+ E+CV
Sbjct: 2226 GLNDRTIEGDFRWSDGHPMQFENWR-------------------PNQPDNFFAAGEDCVV 2266
Query: 299 QA-SDDGSWWDHDCQRRLYYVCE 320
+ G W D C L + C+
Sbjct: 2267 MIWHEKGEWNDVPCNYHLPFTCK 2289
Score = 29.6 bits (65), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 77 EMEEDQGEEEEEEATPTPSSGPSPSPTPEDIVTYI 111
E+E + GE PTP GP+ + T ED+V +
Sbjct: 431 EVENETGEATRPWGFPTPGLGPATAFTSEDLVVQV 465
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDW 76
G G G+ G R G GA EEE E + + E G + P G E ED
Sbjct: 533 GGGGGSGGGGRRCLSGGCGAPEEEEEAALVERRRAGEG-----GEEGDGPPGGKEEDEDD 587
Query: 77 EMEEDQGEEEEEE 89
E EED+ EEE+EE
Sbjct: 588 EEEEDEEEEEDEE 600
Score = 28.5 bits (62), Expect = 8.4
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 28 EWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGT-VEGKEDWEMEEDQGEEE 86
+W+G WG E R+AL P PA + G +
Sbjct: 1150 QWDGPWGCGGEGAAPRQALAAAECP-----PCAMAGPPPAPQPLPGDASFYSLPPPPLPP 1204
Query: 87 EEEATPTPSSGPSPSPTPEDI 107
+ TP+ PSPSP+P+ +
Sbjct: 1205 TSDPLETPAPSPSPSPSPQAV 1225
>gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Homo
sapiens]
Length = 1324
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 20/134 (14%)
Query: 187 CFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRR 246
C+ L ++ + A C A +L ++E L L A W+G+ +
Sbjct: 389 CYKLQKEEKTWHEALRSCQADNSALIDITSLAEVEFLVTLLGDENAS---ETWIGLSSNK 445
Query: 247 AEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSW 306
+ + N V F WH + PH PN L CV+ +G W
Sbjct: 446 IPVSFEWSNDSSVIFTNWH-----------TLEPHIF----PNRSQL--CVSAEQSEGHW 488
Query: 307 WDHDCQRRLYYVCE 320
+C+ RL+Y+C+
Sbjct: 489 KVKNCEERLFYICK 502
Score = 37.0 bits (84), Expect = 0.024
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 21/121 (17%)
Query: 200 AQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRV 259
A + C +GG+L D E ++R ++ VW+G++ + + +G +
Sbjct: 256 AHSSCQMQGGTLLSITD----ETEENFIREHMSSKTVEVWMGLNQLDEHAGWQWSDGTPL 311
Query: 260 SFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRLYYVC 319
++ W PE+ +P H GT + + A W DC+ L Y+C
Sbjct: 312 NYLNWS----PEVNFEPFVEDHC--------GTFSSFMPSA-----WRSRDCESTLPYIC 354
Query: 320 E 320
+
Sbjct: 355 K 355
>gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 1463
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 20/134 (14%)
Query: 187 CFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRR 246
C+ L ++ + A C A +L ++E L L A W+G+ +
Sbjct: 389 CYKLQKEEKTWHEALRSCQADNSALIDITSLAEVEFLVTLLGDENAS---ETWIGLSSNK 445
Query: 247 AEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSW 306
+ + N V F WH + PH PN L CV+ +G W
Sbjct: 446 IPVSFEWSNDSSVIFTNWH-----------TLEPHIF----PNRSQL--CVSAEQSEGHW 488
Query: 307 WDHDCQRRLYYVCE 320
+C+ RL+Y+C+
Sbjct: 489 KVKNCEERLFYICK 502
Score = 37.0 bits (84), Expect = 0.024
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 21/121 (17%)
Query: 200 AQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRRAEGLYLFENGQRV 259
A + C +GG+L D E ++R ++ VW+G++ + + +G +
Sbjct: 256 AHSSCQMQGGTLLSITD----ETEENFIREHMSSKTVEVWMGLNQLDEHAGWQWSDGTPL 311
Query: 260 SFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSWWDHDCQRRLYYVC 319
++ W PE+ +P H GT + + A W DC+ L Y+C
Sbjct: 312 NYLNWS----PEVNFEPFVEDHC--------GTFSSFMPSA-----WRSRDCESTLPYIC 354
Query: 320 E 320
+
Sbjct: 355 K 355
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 17 GFGHGARG-AEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKED 75
G G G G E E E G G +EEE E E + E G G+E G VEG+ +
Sbjct: 970 GEGEGEEGEGEGEEEEGEGEGEEEEGEEEG---EEEGEGEEEGEGEGEEEEEGEVEGEVE 1026
Query: 76 WEMEEDQGEEEEEE 89
E E +GEEEE E
Sbjct: 1027 GEEGEGEGEEEEGE 1040
Score = 37.4 bits (85), Expect = 0.018
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 19 GHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEM 78
G G E E EG G + EE E E + E G G G+E G E +E+ E+
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEV 1021
Query: 79 ------EEDQGEEEEEE 89
EE +GE EEEE
Sbjct: 1022 EGEVEGEEGEGEGEEEE 1038
Score = 36.6 bits (83), Expect = 0.031
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDW 76
G G G E EG W G +EEE E E E G G G+E E + +
Sbjct: 939 GEGEDGEGEGEEEEGEWEG-EEEEGEGEG-------EEEG--EGEGEEGEGEGEEEEGEG 988
Query: 77 EMEEDQGEEEEEEATPTPSSGPSPSPTPED 106
E EE++GEEE EE G E+
Sbjct: 989 EGEEEEGEEEGEEEGEGEEEGEGEGEEEEE 1018
Score = 34.7 bits (78), Expect = 0.12
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 28 EWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEMEEDQGEEEE 87
E EG G +EEE E + +E + G +E E +E+ E EE++GE EE
Sbjct: 788 EEEGDQGEGEEEETEGRG---EEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEE 844
Query: 88 EEATPTPSSG 97
EE G
Sbjct: 845 EEGEGEEEEG 854
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 19 GHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGD-ENPAGTVEGKEDWE 77
G G E EG G +E E E E + E G G G+ E G +G+E+ E
Sbjct: 871 GEEGEGEGEEEEGEGEGEEEGEGEGE----EEEGEGEGEEEGEGEGEEEEGEGKGEEEGE 926
Query: 78 MEEDQGEEEEEEATPTPSSG 97
E +GEEEE E G
Sbjct: 927 EGEGEGEEEEGEGEGEDGEG 946
Score = 33.5 bits (75), Expect = 0.26
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDW 76
G G G E E E G G +EEE E E + +E G+E G EG+ +
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEE--------GEEEGEGEEEGEGEG 1013
Query: 77 EMEED---QGEEEEEE 89
E EE+ +GE E EE
Sbjct: 1014 EEEEEGEVEGEVEGEE 1029
Score = 32.7 bits (73), Expect = 0.45
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 24 GAEREWEG-----GWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKED--- 75
G E E EG G G +EEE E + E G E G EG+E+
Sbjct: 895 GEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGE 954
Query: 76 WEMEEDQGEEEEEE 89
WE EE++GE E EE
Sbjct: 955 WEGEEEEGEGEGEE 968
Score = 32.3 bits (72), Expect = 0.58
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 24 GAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEMEEDQG 83
G E E EG + EE E E + +E G G E EG+ + E EE +G
Sbjct: 835 GEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGE-EEGEG 893
Query: 84 EEEEEE 89
E EEEE
Sbjct: 894 EGEEEE 899
Score = 31.6 bits (70), Expect = 1.00
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKH----LQEALGLPAGRGDENPAGTVE- 71
G G + EW+ G ++E++ERE K ++E G G+E E
Sbjct: 690 GEGEKELAEKEEWKKR-DGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEE 748
Query: 72 ------GKEDWEMEEDQGEEEEEE 89
GKE+ E EE +GE E+EE
Sbjct: 749 EEKEGEGKEEGEGEEVEGEREKEE 772
Score = 31.2 bits (69), Expect = 1.3
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDW 76
G G E E E G G +EE E E +E G G E EG+ +
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEG----EGEEEEGEGEGEDGEGEGEEEEGEWEG 957
Query: 77 EMEEDQGEEEEE 88
E EE +GE EEE
Sbjct: 958 EEEEGEGEGEEE 969
Score = 30.0 bits (66), Expect = 2.9
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 26 EREWEGGWGGAQEEE---REREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEMEEDQ 82
ERE E G +EEE E E + E G G E EG+ + E EE +
Sbjct: 825 EREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGE 884
Query: 83 GEEEEE 88
GE EEE
Sbjct: 885 GEGEEE 890
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 21 GARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDWEMEE 80
G E E EG G E E E E + ++ G G +E E +++ E EE
Sbjct: 995 GEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEE 1054
Query: 81 DQGEEEEEE 89
++ EEEE
Sbjct: 1055 NRRNREEEE 1063
Score = 30.0 bits (66), Expect = 2.9
Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 11/71 (15%)
Query: 17 GFGHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKEDW 76
G G E E EG G +EEE E E G G E EG+E+
Sbjct: 995 GEEEGEEEGEGEEEGEGEGEEEEEGEVE-----------GEVEGEEGEGEGEEEEGEEEG 1043
Query: 77 EMEEDQGEEEE 87
E E +GE EE
Sbjct: 1044 EEREKEGEGEE 1054
Score = 30.0 bits (66), Expect = 2.9
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 17 GFGHGARGAEREWEG------GWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTV 70
G G G E E EG G G +EEE E E + G G+EN
Sbjct: 1009 GEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREK--------EGEGEENRRNRE 1060
Query: 71 EGKEDWEMEEDQGEEEEE 88
E +E+ ++ GEEE E
Sbjct: 1061 EEEEEEGKYQETGEEENE 1078
Score = 28.9 bits (63), Expect = 6.5
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 18/86 (20%)
Query: 19 GHGARGAEREWEGG---WGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVE---- 71
GH + EGG G +EEE +RE + +E G G G+E +
Sbjct: 718 GHQKERNQEMEEGGEEEHGEGEEEEGDREE---EEEKEGEGKEEGEGEEVEGEREKEEGE 774
Query: 72 -------GKED-WEMEEDQGEEEEEE 89
GKE+ E E DQGE EEEE
Sbjct: 775 RKKEERAGKEEKGEEEGDQGEGEEEE 800
Score = 28.9 bits (63), Expect = 6.5
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 19 GHGARGAEREWEGGWGGAQEEEREREALMLKHLQEALGLPAGRGDENPAGTVEGKE-DWE 77
G G R E E E G G +E E E E + +E G G+E G EG+E + E
Sbjct: 822 GKGER--EEEEEEGEGEEEEGEGEEEEGEGEE-EEGEGKGEEEGEEGE-GEEEGEEGEGE 877
Query: 78 MEEDQGEEEEEE 89
EE++GE E EE
Sbjct: 878 GEEEEGEGEGEE 889
>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
Length = 775
Score = 41.6 bits (96), Expect = 0.001
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 113 GRLAG--LDAGLHQLHVRLHALDTRVVELTQGLRQLRNA-AGDTRDAVQALQEAQGRAER 169
G AG +D LHQL +L L + + +TQ ++ + D + Q L++A +AE
Sbjct: 147 GPFAGGEVDKRLHQLKTQLATLTSSLATVTQEKSRMEASYLADKKKMKQDLEDASNKAEE 206
Query: 170 EHGRLEGCLKGLR 182
E RLEG LKGL+
Sbjct: 207 ERARLEGELKGLQ 219
>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
Length = 1722
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 19/134 (14%)
Query: 187 CFLLSRDFEAQAAAQARCTARGGSLAQPADRQQMEALTRYLRAALAPYNWPVWLGVHDRR 246
C+LL + + A A+C A L +E + L VW+G+ +
Sbjct: 372 CYLLVNESNSWDKAHAKCKAFSSDLISIHSLADVEVVVTKLHNE--DIKEEVWIGLKNIN 429
Query: 247 AEGLYLFENGQRVSFFAWHRSPRPELGAQPSASPHPLSPDQPNGGTLENCVAQASDDGSW 306
L+ + +G V+ W + P+ P T NCV+ + G W
Sbjct: 430 IPTLFQWSDGTEVTLTYWDEN----------------EPNVPYNKT-PNCVSYLGELGQW 472
Query: 307 WDHDCQRRLYYVCE 320
C+ +L YVC+
Sbjct: 473 KVQSCEEKLKYVCK 486
Score = 32.3 bits (72), Expect = 0.58
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 285 PDQPNGGTL--ENCVAQASDDGSWWDHDCQRRLYYVCEFP 322
PD+P+ T+ +C ++ G W C+ +L YVC P
Sbjct: 304 PDRPSAPTIGGSSCARMDAESGLWQSFSCEAQLPYVCRKP 343
>gi|4885065 amyloid precursor-like protein 1 isoform 2 precursor
[Homo sapiens]
Length = 650
Score = 39.3 bits (90), Expect = 0.005
Identities = 59/211 (27%), Positives = 81/211 (38%), Gaps = 48/211 (22%)
Query: 54 ALGLPAGRGDENPAGTVEGKEDWEMEEDQGE------------EEEEEATPTPSSGP--- 98
A+G P+ R P VEG ED E EE + EEEEE P PSS
Sbjct: 222 AVGDPSTRSWP-PGSRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAV 280
Query: 99 ----SPSPTPEDIVTYILGRLAGLDAGLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTR 154
+P+P P D V G + L ++ + R+ ++ + +R+ A ++
Sbjct: 281 VGKVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSK 340
Query: 155 DAVQALQEAQGRAEREHGR-----LEGCLKGLRLGHKCFLLSRDFEAQAAA-------QA 202
+ L +A +A EH + LE + G R R E A Q
Sbjct: 341 N----LPKADRQALNEHFQSILQTLEEQVSGER--------QRLVETHATRVIALINDQR 388
Query: 203 RCTARGGSLAQPADRQQME----ALTRYLRA 229
R G A AD Q E AL RYLRA
Sbjct: 389 RAALEGFLAALQADPPQAERVLLALRRYLRA 419
>gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor
[Homo sapiens]
Length = 651
Score = 39.3 bits (90), Expect = 0.005
Identities = 59/211 (27%), Positives = 81/211 (38%), Gaps = 48/211 (22%)
Query: 54 ALGLPAGRGDENPAGTVEGKEDWEMEEDQGE------------EEEEEATPTPSSGP--- 98
A+G P+ R P VEG ED E EE + EEEEE P PSS
Sbjct: 222 AVGDPSTRSWP-PGSRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAV 280
Query: 99 ----SPSPTPEDIVTYILGRLAGLDAGLHQLHVRLHALDTRVVELTQGLRQLRNAAGDTR 154
+P+P P D V G + L ++ + R+ ++ + +R+ A ++
Sbjct: 281 VGKVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSK 340
Query: 155 DAVQALQEAQGRAEREHGR-----LEGCLKGLRLGHKCFLLSRDFEAQAAA-------QA 202
+ L +A +A EH + LE + G R R E A Q
Sbjct: 341 N----LPKADRQALNEHFQSILQTLEEQVSGER--------QRLVETHATRVIALINDQR 388
Query: 203 RCTARGGSLAQPADRQQME----ALTRYLRA 229
R G A AD Q E AL RYLRA
Sbjct: 389 RAALEGFLAALQADPPQAERVLLALRRYLRA 419
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,106,279
Number of Sequences: 37866
Number of extensions: 864069
Number of successful extensions: 11210
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 9409
Number of HSP's gapped (non-prelim): 1345
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.