COLEC11 3001

Name: COLEC11	Sequence: fasta or formatted (271aa)		NCBI GI: 13128972
Description: collectin sub-family member 11 isoform a		Referenced in: Liver
Other entries for this name: alt prot [268aa] collectin sub-family member 11 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 22 2 C cysteine 2.6 7 1 D aspartate 6.3 17 2 E glutamate 7.4 20 2 F phenylalanine 2.6 7 1 G glycine 14.8 40 2 H histidine 1.5 4 1 I isoleucine 3.7 10 1 K lysine 7.0 19 1 L leucine 7.7 21 2 M methionine 3.7 10 1 N asparagine 4.1 11 2 P proline 5.9 16 2 Q glutamine 3.3 9 1 R arginine 4.1 11 1 S serine 6.3 17 1 T threonine 2.6 7 2 V valine 5.5 15 1 W tryptophan 0.7 2 1 Y tyrosine 2.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collectin sub-family member 11 isoform a COLEC11 0.753 collectin sub-family member 11 isoform b COLEC10 0.474 collectin sub-family member 10 SFTPD 0.204 pulmonary surfactant-associated protein D precursor ... MBL2 0.161 soluble mannose-binding lectin precursor SFTPA2 0.154 surfactant protein A2 SFTPA2B 0.154 surfactant, pulmonary-associated protein A2 SFTPA1B 0.150 surfactant, pulmonary-associated protein A1B SFTPA1 0.140 surfactant protein A1 COLEC12 0.140 collectin sub-family member 12 COL5A1 0.120 alpha 1 type V collagen preproprotein COL2A1 0.114 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.114 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL11A2 0.110 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.110 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.110 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL17A1 0.105 alpha 1 type XVII collagen GLDN 0.105 gliomedin COL21A1 0.103 collagen, type XXI, alpha 1 precursor COL9A1 0.103 alpha 1 type IX collagen isoform 1 precursor COL4A3 0.103 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.103 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.103 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.103 alpha 3 type IV collagen isoform 1 precursor COL9A1 0.103 alpha 1 type IX collagen isoform 2 precursor COL23A1 0.103 collagen, type XXIII, alpha 1 COL4A1 0.103 alpha 1 type IV collagen preproprotein C1QTNF7 0.103 C1q and tumor necrosis factor related protein 7 isof... C1QTNF7 0.103 C1q and tumor necrosis factor related protein 7 iso... C1QTNF7 0.103 C1q and tumor necrosis factor related protein 7 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.