COLEC11 27517

Name: COLEC11	Sequence: fasta or formatted (268aa)		NCBI GI: 40548420
Description: collectin sub-family member 11 isoform b		Referenced in: Liver
Other entries for this name: alt prot [271aa] collectin sub-family member 11 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 21 2 C cysteine 3.0 8 1 D aspartate 5.6 15 1 E glutamate 9.0 24 2 F phenylalanine 2.6 7 1 G glycine 11.2 30 2 H histidine 1.1 3 1 I isoleucine 3.4 9 1 K lysine 7.8 21 2 L leucine 5.6 15 2 M methionine 4.5 12 1 N asparagine 3.7 10 2 P proline 5.2 14 2 Q glutamine 3.7 10 1 R arginine 5.2 14 2 S serine 9.0 24 3 T threonine 3.7 10 2 V valine 4.9 13 2 W tryptophan 0.7 2 1 Y tyrosine 2.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collectin sub-family member 11 isoform b COLEC11 0.769 collectin sub-family member 11 isoform a COLEC10 0.417 collectin sub-family member 10 SFTPD 0.159 pulmonary surfactant-associated protein D precursor ... MBL2 0.145 soluble mannose-binding lectin precursor SFTPA1B 0.115 surfactant, pulmonary-associated protein A1B SFTPA2 0.107 surfactant protein A2 SFTPA2B 0.107 surfactant, pulmonary-associated protein A2 SFTPA1 0.105 surfactant protein A1 COLEC12 0.096 collectin sub-family member 12 CD209 0.076 CD209 molecule isoform 7 CD209 0.076 CD209 molecule isoform 5 CLEC4M 0.076 C-type lectin domain family 4, member M isoform 9 [... CLEC4M 0.076 C-type lectin domain family 4, member M isoform 12 ... CLEC4M 0.076 C-type lectin domain family 4, member M isoform 2 [... CLEC4M 0.076 C-type lectin domain family 4, member M isoform 8 [... CLEC4M 0.076 C-type lectin domain family 4, member M isoform 1 [H... CLEC4M 0.076 C-type lectin domain family 4, member M isoform 7 [... CD209 0.075 CD209 molecule isoform 3 CD209 0.075 CD209 molecule isoform 6 CD209 0.075 CD209 molecule isoform 1 CLEC4M 0.075 C-type lectin domain family 4, member M isoform 11 ... C1QTNF7 0.073 C1q and tumor necrosis factor related protein 7 isof... C1QTNF7 0.073 C1q and tumor necrosis factor related protein 7 iso... C1QTNF7 0.073 C1q and tumor necrosis factor related protein 7 iso... CLEC3A 0.071 C-type lectin domain family 3 member A CD209 0.069 CD209 molecule isoform 4 NCAN 0.069 chondroitin sulfate proteoglycan 3 CLEC11A 0.067 stem cell growth factor precursor COL5A3 0.067 collagen, type V, alpha 3 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.