Guide to the Human Genome
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Name: B4GALT3 Sequence: fasta or formatted (393aa) NCBI GI: 4502349
Description:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3

Referenced in:

Galactose and Lactose
Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         25           1
 C cysteine            1.3          5           1
 D aspartate           4.6         18           3
 E glutamate           4.3         17           2
 F phenylalanine       3.1         12           1
 G glycine             9.4         37           2
 H histidine           4.1         16           2
 I isoleucine          2.3          9           2
 K lysine              1.8          7           1
 L leucine            11.7         46           3
 M methionine          2.3          9           2
 N asparagine          4.1         16           1
 P proline            10.4         41           2
 Q glutamine           3.8         15           2
 R arginine            9.4         37           2
 S serine              6.1         24           2
 T threonine           3.8         15           1
 V valine              5.6         22           1
 W tryptophan          1.0          4           1
 Y tyrosine            4.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... 
B4GALT1               0.380   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
B4GALT2               0.366   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.366   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
B4GALT4               0.347   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.347   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT5               0.274   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT6               0.269   beta-1,4-galactosyltransferase 6 
B4GALT7               0.117   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
LOC100293055          0.013   PREDICTED: similar to COL22A1 protein 
COL22A1               0.013   collagen, type XXII, alpha 1 
GALNT3                0.010   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
GALNT6                0.010   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
COL4A5                0.009   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.009   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.009   type IV collagen alpha 5 isoform 3 precursor 
COL14A1               0.009   collagen, type XIV, alpha 1 
ADAM12                0.009   ADAM metallopeptidase domain 12 isoform 1 preproprot...
FIGNL2                0.009   fidgetin-like 2 
CHSY1                 0.009   chondroitin sulfate synthase 1 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform a 
TSG101                0.007   tumor susceptibility gene 101 
LOC392555             0.007   PREDICTED: similar to melanoma antigen family C, 2 ...
LOC392555             0.007   PREDICTED: similar to melanoma antigen family C, 2 ...
COL18A1               0.007   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.007   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.007   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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