Guide to the Human Genome
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Name: B4GALT5 Sequence: fasta or formatted (388aa) NCBI GI: 4757828
Description:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5

Referenced in:

Galactose and Lactose
Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         20           2
 C cysteine            1.0          4           1
 D aspartate           5.7         22           3
 E glutamate           4.6         18           1
 F phenylalanine       6.7         26           3
 G glycine             6.7         26           2
 H histidine           3.4         13           3
 I isoleucine          4.4         17           1
 K lysine              3.9         15           1
 L leucine            11.1         43           2
 M methionine          3.1         12           2
 N asparagine          5.7         22           2
 P proline             5.4         21           1
 Q glutamine           4.4         17           1
 R arginine            7.0         27           2
 S serine              5.2         20           3
 T threonine           4.4         17           3
 V valine              5.4         21           2
 W tryptophan          1.5          6           1
 Y tyrosine            5.4         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ... 
B4GALT6               0.721   beta-1,4-galactosyltransferase 6 
B4GALT3               0.279   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT1               0.273   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1...
B4GALT2               0.261   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2...
B4GALT2               0.261   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ...
B4GALT4               0.230   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.230   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT7               0.128   xylosylprotein beta 1,4-galactosyltransferase 7 [Homo...
B4GALNT4              0.014   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
CHSY1                 0.010   chondroitin sulfate synthase 1 
COX3                  0.009   cytochrome c oxidase subunit III 
GALNT3                0.009   polypeptide N-acetylgalactosaminyltransferase 3 [Ho...
COX3                  0.008   cytochrome c oxidase subunit III 
GALNT6                0.008   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
KY                    0.006   kyphoscoliosis peptidase 
MGAT5B                0.006   N-acetylglucosaminyltranferase VB isoform 2 
MGAT5B                0.006   N-acetylglucosaminyltranferase VB isoform 1 
RPS6KA6               0.005   ribosomal protein S6 kinase polypeptide 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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