COL14A1 32817

Name: COL14A1	Sequence: fasta or formatted (1796aa)		NCBI GI: 55743096
Description: collagen, type XIV, alpha 1		Referenced in: Collagen Fibronectin Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 94 2 C cysteine 1.1 19 2 D aspartate 5.2 93 2 E glutamate 6.6 118 3 F phenylalanine 3.3 60 2 G glycine 10.9 195 3 H histidine 1.6 29 1 I isoleucine 5.5 99 2 K lysine 4.8 86 2 L leucine 7.2 129 3 M methionine 1.8 33 2 N asparagine 3.2 58 2 P proline 8.7 156 2 Q glutamine 4.0 71 2 R arginine 4.1 74 2 S serine 7.4 133 3 T threonine 7.6 136 2 V valine 7.9 142 3 W tryptophan 1.0 18 1 Y tyrosine 3.0 53 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 collagen, type XIV, alpha 1 COL12A1 0.342 collagen, type XII, alpha 1 short isoform precursor ... COL12A1 0.342 collagen, type XII, alpha 1 long isoform precursor [... COL20A1 0.120 collagen, type XX, alpha 1 COL22A1 0.104 collagen, type XXII, alpha 1 COL21A1 0.098 collagen, type XXI, alpha 1 precursor COL7A1 0.084 alpha 1 type VII collagen precursor COL9A1 0.072 alpha 1 type IX collagen isoform 1 precursor LOC100293055 0.065 PREDICTED: similar to COL22A1 protein COL16A1 0.065 alpha 1 type XVI collagen precursor COL4A5 0.063 type IV collagen alpha 5 isoform 3 precursor COL4A5 0.063 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.063 type IV collagen alpha 5 isoform 1 precursor COL3A1 0.061 collagen type III alpha 1 preproprotein COL9A1 0.061 alpha 1 type IX collagen isoform 2 precursor COL11A1 0.061 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.061 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.061 alpha 1 type XI collagen isoform A preproprotein [Ho... COL5A1 0.061 alpha 1 type V collagen preproprotein COL9A3 0.060 alpha 3 type IX collagen COL4A3 0.060 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.060 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.060 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.060 alpha 3 type IV collagen isoform 1 precursor COL10A1 0.060 type X collagen alpha 1 precursor COL2A1 0.060 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.060 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A2 0.059 alpha 2 type V collagen preproprotein COL8A1 0.059 alpha 1 type VIII collagen precursor COL8A1 0.059 alpha 1 type VIII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.